Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 1.2e-32 142.5 68 100.0
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 1.5e-27 125.6 60 98.3
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 2.6e-27 124.8 62 91.9
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 2.6e-27 124.8 62 91.9
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 4.4e-27 124.0 63 92.1
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 7.4e-27 123.2 62 90.3
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 9.7e-27 122.9 63 92.1
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 2.8e-26 121.3 62 88.7
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.8e-26 120.6 59 91.5
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.8e-26 120.6 59 91.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 6.3e-26 120.2 63 87.3
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 6.3e-26 120.2 63 88.9
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 6.3e-26 120.2 59 94.9
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 6.3e-26 120.2 62 90.3
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.2e-26 119.8 63 88.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.1e-25 119.4 59 89.8
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.1e-25 119.4 59 89.8
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 83.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.8e-25 118.6 58 94.8
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 66 80.3
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.4e-25 118.2 59 91.5
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 3.1e-25 117.9 62 87.1
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 3.1e-25 117.9 59 89.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 3.1e-25 117.9 65 83.1
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 5.3e-25 117.1 60 86.7
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.0e-25 116.7 64 82.8
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 62 85.5
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 7.0e-25 116.7 60 90.0
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 7.0e-25 116.7 60 90.0
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 7.0e-25 116.7 63 85.7
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 9.1e-25 116.3 60 86.7
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 9.1e-25 116.3 58 91.4
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 9.1e-25 116.3 58 89.7
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.2e-24 115.9 62 85.5
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.2e-24 115.9 63 84.1
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.2e-24 115.9 63 84.1
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.6e-24 115.5 59 88.1
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 2.0e-24 115.2 60 88.3
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.0e-24 115.2 68 80.9
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.0e-24 115.2 68 80.9
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 2.0e-24 115.2 65 80.0
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 84.6
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 3.5e-24 114.4 59 88.1
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 4.5e-24 114.0 62 83.9
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 5.9e-24 113.6 60 85.0
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 5.9e-24 113.6 58 87.9
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 7.7e-24 113.2 59 86.4
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 7.7e-24 113.2 59 86.4
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 7.7e-24 113.2 58 86.2
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 7.7e-24 113.2 58 89.7
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.0e-23 112.8 59 86.4
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 1.0e-23 112.8 59 86.4
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 1.0e-23 112.8 59 86.4
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.0e-23 112.8 59 86.4
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.0e-23 112.8 59 86.4
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.3e-23 112.5 59 86.4
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.7e-23 112.1 58 86.2
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.2e-23 111.7 62 82.3
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 2.9e-23 111.3 63 82.5
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.8e-23 110.9 59 83.1
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 5.0e-23 110.5 59 83.1
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.5e-22 109.0 63 79.4
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.5e-22 109.0 63 79.4
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.9e-22 108.6 62 77.4
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.2e-22 107.8 58 84.5
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 4.2e-22 107.5 60 83.3
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.5e-22 107.1 59 81.4
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 7.2e-22 106.7 55 87.3
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 9.4e-22 106.3 54 90.7
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 9.4e-22 106.3 57 84.2
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.6e-21 105.5 55 81.8
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 6.1e-21 103.6 55 85.5
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 3.0e-20 101.3 57 78.9
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 4.0e-20 100.9 53 83.0
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 7.5e-19 96.7 60 75.0
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 2.2e-18 95.1 63 66.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.8e-17 92.0 62 66.1
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 4.1e-17 90.9 60 71.7
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.3e-15 85.9 66 63.6
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 3.8e-15 84.3 68 63.2
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.9e-14 82.0 48 81.2
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.4e-12 75.9 40 85.0
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.4e-12 75.9 43 76.7
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 7.5e-11 70.1 56 57.1
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.3e-10 69.3 36 86.1
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.3e-10 69.3 36 86.1
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.7e-10 68.9 36 86.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.7e-10 68.9 36 86.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 4.8e-10 67.4 38 78.9
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 53 50.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 53 50.9
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 4.1e-09 64.3 46 60.9
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 3.5e-08 61.2 54 50.0


User provided reference genes

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