Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 4.6e-55 217.6 107 100.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.1e-44 182.2 105 82.9
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.8e-44 181.8 107 80.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 4.7e-44 181.0 107 81.3
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.8e-43 179.1 105 81.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.4e-43 178.7 107 79.4
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.4e-43 178.7 105 81.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.0e-43 177.9 105 81.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 5.2e-43 177.6 105 81.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 5.2e-43 177.6 108 80.6
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 5.2e-43 177.6 108 80.6
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 6.8e-43 177.2 105 81.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.5e-42 176.0 104 78.8
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.5e-42 176.0 104 78.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.5e-42 176.0 104 78.8
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.5e-42 176.0 105 80.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.5e-42 176.0 105 81.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.5e-42 176.0 108 80.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.6e-42 175.3 109 78.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 3.4e-42 174.9 107 80.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 80.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 80.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 80.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 4.4e-42 174.5 107 79.4
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 4.4e-42 174.5 104 77.9
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.4e-42 174.5 100 82.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.8e-42 174.1 103 78.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 7.6e-42 173.7 105 78.1
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 7.6e-42 173.7 108 79.6
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.6e-42 173.7 105 77.1
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 9.9e-42 173.3 105 79.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.7e-41 172.6 105 78.1
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.9e-41 171.0 105 78.1
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.4e-41 170.6 109 78.9
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 6.4e-41 170.6 108 77.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 6.4e-41 170.6 102 80.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 8.4e-41 170.2 105 77.1
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.1e-40 169.9 100 79.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 1.9e-40 169.1 105 78.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.2e-40 168.3 108 76.9
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 4.1e-40 167.9 106 77.4
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 4.1e-40 167.9 107 72.9
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 5.4e-40 167.5 97 82.5
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.1e-40 167.2 98 77.6
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 9.2e-40 166.8 102 82.4
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.2e-39 166.4 108 73.1
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.6e-39 166.0 98 76.5
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.6e-39 166.0 105 72.4
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 7.8e-39 163.7 106 73.6
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.0e-38 163.3 105 77.1
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.3e-38 162.9 106 72.6
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.3e-38 162.9 105 72.4
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.7e-38 162.5 97 80.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.3e-38 162.2 104 77.9
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.3e-38 162.2 97 80.4
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.0e-38 161.8 98 76.5
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.0e-38 161.8 100 77.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 3.0e-38 161.8 102 78.4
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.9e-38 161.4 108 72.2
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 3.9e-38 161.4 108 73.1
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.1e-38 161.0 98 76.5
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.6e-38 160.6 95 77.9
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 6.6e-38 160.6 92 83.7
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 6.6e-38 160.6 137 62.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 6.6e-38 160.6 106 71.7
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.6e-38 160.2 100 76.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.6e-38 160.2 100 76.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 2.5e-37 158.7 98 75.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.5e-37 158.7 107 71.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 4.3e-37 157.9 107 69.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 4.3e-37 157.9 107 69.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 5.6e-37 157.5 107 70.1
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 9.6e-37 156.8 97 74.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.6e-36 154.8 107 67.3
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.7e-36 154.5 107 72.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 6.2e-36 154.1 105 72.4
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 6.2e-36 154.1 100 73.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 6.2e-36 154.1 100 73.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 8.1e-36 153.7 102 78.4
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.1e-35 153.3 90 80.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.4e-35 152.1 98 77.6
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.1e-35 151.8 107 67.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.5e-34 149.4 153 56.9
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.4e-34 148.3 101 68.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 3.4e-34 148.3 92 76.1
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 7.6e-34 147.1 92 79.3
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.2e-33 145.6 105 67.6
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.2e-33 145.6 91 72.5
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.7e-31 138.7 100 70.0
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 3.0e-30 135.2 102 70.6
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.0e-30 135.2 87 78.2
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 4.3e-29 131.3 87 74.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.6e-28 129.4 94 70.2
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 6.2e-28 127.5 88 72.7
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.8e-27 125.9 101 59.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.8e-27 125.9 86 73.3
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.4e-27 125.6 90 65.6
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 5.3e-27 124.4 88 72.7
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.2e-26 123.2 85 72.9
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.0e-26 122.5 101 61.4
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.5e-26 121.3 89 65.2
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.2e-24 115.2 87 65.5
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 6.7e-22 107.5 92 55.4
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.5e-21 106.3 88 67.0
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.5e-21 106.3 78 73.1
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 4.3e-21 104.8 84 61.9
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 7.4e-21 104.0 58 81.0
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.1e-20 102.4 89 53.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 5.3e-19 97.8 55 80.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 5.3e-19 97.8 56 82.1
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-18 96.7 75 66.7
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.6e-18 95.5 95 53.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-15 86.7 56 75.0
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 4.3e-13 78.2 53 75.5
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.9e-08 62.8 52 57.7
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.1e-08 60.8 45 62.2


User provided reference genes

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