Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 5.9e-236 820.5 412 100.0
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.9e-141 506.5 367 66.2
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 1.9e-141 506.5 367 66.2
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.2e-140 503.8 367 66.2
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 8.0e-140 501.1 363 67.2
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 1.0e-139 500.7 389 63.5
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 5.9e-135 485.0 364 64.3
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.0e-134 484.2 364 64.3
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.3e-134 483.8 364 64.3
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.3e-134 483.8 364 64.3
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.2e-134 483.0 367 63.2
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 5.0e-134 481.9 364 64.0
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.5e-133 480.3 328 68.3
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 2.7e-132 476.1 363 63.6
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 8.0e-132 474.6 348 65.5
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 8.0e-132 474.6 390 59.2
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 1.2e-130 470.7 363 62.0
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 2.0e-130 469.9 364 63.7
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 2.2e-129 466.5 336 65.8
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 2.8e-129 466.1 411 56.0
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 1.8e-128 463.4 336 65.8
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 5.4e-128 461.8 333 66.1
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 4.5e-127 458.8 367 59.9
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 7.7e-127 458.0 368 62.0
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 5.0e-126 455.3 364 61.8
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 5.0e-126 455.3 363 59.5
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 5.0e-126 455.3 367 60.2
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 8.5e-126 454.5 352 61.1
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 1.9e-125 453.4 342 62.6
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 5.5e-125 451.8 363 60.1
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.2e-124 450.7 363 59.5
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 8.0e-124 448.0 334 62.9
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.0e-123 447.6 377 57.6
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.4e-123 447.2 408 54.7
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 1.4e-123 447.2 299 70.2
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 6.8e-123 444.9 333 63.7
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 5.7e-122 441.8 328 62.5
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.3e-121 440.7 349 63.3
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 2.2e-121 439.9 367 59.4
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 3.7e-121 439.1 339 62.8
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 4.9e-121 438.7 367 57.8
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 8.3e-121 438.0 324 64.2
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 1.8e-120 436.8 367 59.1
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 7.0e-120 434.9 367 57.8
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 1.2e-119 434.1 348 60.6
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 2.0e-119 433.3 367 57.2
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 2.0e-119 433.3 334 60.2
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 3.5e-119 432.6 334 62.3
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 1.0e-118 431.0 336 61.3
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.7e-118 430.3 286 70.6
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 2.3e-118 429.9 406 53.9
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 2.9e-118 429.5 367 56.7
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 2.9e-118 429.5 402 53.7
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 2.9e-118 429.5 336 60.7
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 5.6e-117 425.2 313 64.9
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.6e-116 423.7 344 59.0
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 4.7e-116 422.2 348 59.2
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 4.7e-116 422.2 406 53.7
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 4.7e-116 422.2 348 58.9
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 4.7e-116 422.2 367 56.1
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 6.1e-116 421.8 314 62.4
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 6.1e-116 421.8 364 57.4
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 1.0e-115 421.0 367 56.7
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 1.4e-115 420.6 348 58.9
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.5e-114 417.2 338 59.2
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 4.4e-114 415.6 363 57.3
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.8e-112 410.2 328 61.3
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 5.4e-112 408.7 336 57.1
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 1.6e-111 407.1 367 54.2
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 5.9e-111 405.2 360 55.8
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 7.8e-111 404.8 412 53.6
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 2.3e-110 403.3 318 60.7
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 2.3e-110 403.3 340 57.4
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 7.3e-109 398.3 366 53.6
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 2.1e-108 396.7 367 55.0
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 1.0e-107 394.4 333 56.8
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.6e-106 389.8 407 51.8
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 7.5e-106 388.3 320 57.8
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 1.4e-104 384.0 327 58.1
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 1.9e-104 383.6 362 53.6
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 2.7e-103 379.8 348 53.4
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 4.6e-103 379.0 246 71.1
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 7.8e-103 378.3 367 54.0
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 3.9e-102 375.9 402 48.8
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 2.2e-97 360.1 369 50.4
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 2.7e-95 353.2 246 66.7
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 3.5e-95 352.8 367 49.6
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 4.6e-95 352.4 336 52.1
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 3.6e-92 342.8 332 51.8
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 3.1e-91 339.7 329 51.7
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 1.2e-90 337.8 332 51.2
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 3.2e-88 329.7 233 66.1
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 4.6e-87 325.9 354 49.2
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 1.0e-86 324.7 218 68.3
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 8.1e-84 315.1 297 52.5
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.4e-83 313.5 208 70.7
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 4.0e-83 312.8 363 46.3
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 7.6e-82 308.5 291 52.9
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 9.3e-80 301.6 248 59.3
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 2.7e-79 300.1 299 49.5
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 1.3e-76 291.2 350 46.0
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 5.4e-72 275.8 205 65.4
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 1.3e-54 218.0 186 57.5
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 3.0e-46 190.3 153 58.2
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 1.3e-44 184.9 336 34.5
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 2.5e-40 170.6 199 47.2
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 6.1e-39 166.0 238 41.6
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 1.1e-35 155.2 166 49.4
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 3.0e-30 137.1 196 39.3
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 6.7e-22 109.4 132 41.7
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 6.5e-17 92.8 169 36.1
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 1.1e-16 92.0 250 28.8
Sabra06G0059400 Salix brachista HOM05D007036 ORTHO05D008885 2.8e-12 77.4 125 33.6
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 6.3e-12 76.3 194 32.0
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 9.1e-11 72.4 202 31.2
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 3.5e-10 70.5 187 31.0
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 7.7e-10 69.3 252 29.0
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 7.7e-10 69.3 193 31.6
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 5.0e-09 66.6 192 30.7
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 5.0e-09 66.6 195 27.7
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 1.5e-08 65.1 192 31.2
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 2.5e-08 64.3 160 31.2
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 4.2e-08 63.5 192 29.2
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 7.2e-08 62.8 191 29.8
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 2.1e-07 61.2 187 31.0
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 4.7e-07 60.1 187 30.5
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 4.7e-07 60.1 201 26.4
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 4.7e-07 60.1 201 26.4
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 1.4e-06 58.5 47 48.9
FAN25G0122 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.8e-06 58.2 259 22.4
FAN25G0874 Fragaria x ananassa HOM05D000189 ORTHO05D000474 1.8e-06 58.2 259 22.4
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 2.3e-06 57.8 197 27.4
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 4.0e-06 57.0 156 29.5
FAN16G1783 Fragaria x ananassa HOM05D000001 ORTHO05D000003 6.8e-06 56.2 259 22.4
TWI14G1022 Tripterygium wilfordii HOM05D003056 ORTHO05D003422 6.8e-06 56.2 177 26.6
CBR_g10841 Chara braunii HOM05D001779 ORTHO05D001753 8.8e-06 55.8 109 25.7
FAN09G4562 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.8e-06 55.8 263 23.2
Rhsim10G0182600 Rhododendron simsii HOM05D000001 ORTHO05D010426 8.8e-06 55.8 271 23.2


User provided reference genes

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