Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.3e-62 243.0 138 100.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 2.4e-40 169.1 146 66.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.2e-38 162.5 153 64.1
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.9e-38 162.2 142 60.6
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.8e-38 161.8 139 62.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 6.5e-38 161.0 144 63.2
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.9e-37 159.5 144 62.5
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.2e-37 158.7 151 62.9
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 4.2e-37 158.3 147 60.5
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.1e-36 156.0 91 83.5
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 2.1e-36 156.0 148 62.2
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.1e-36 156.0 91 85.7
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.7e-36 155.6 146 58.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.6e-36 155.2 91 85.7
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.1e-36 154.5 146 58.2
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 8.0e-36 154.1 91 82.4
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 1.0e-35 153.7 91 84.6
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 1.0e-35 153.7 91 83.5
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.0e-35 153.7 91 82.4
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.4e-35 153.3 91 81.3
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.8e-35 152.9 143 58.7
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.8e-35 152.9 139 59.7
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.8e-35 152.9 153 58.2
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 2.3e-35 152.5 146 60.3
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 2.3e-35 152.5 91 81.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 3.0e-35 152.1 89 85.4
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.0e-35 152.1 143 58.0
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.0e-35 152.1 136 60.3
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 4.0e-35 151.8 91 83.5
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 5.2e-35 151.4 138 60.1
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 6.8e-35 151.0 91 80.2
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 6.8e-35 151.0 144 61.8
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.8e-35 150.6 144 56.9
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 8.8e-35 150.6 91 83.5
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.2e-34 150.2 91 84.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.5e-34 149.8 91 81.3
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 1.5e-34 149.8 91 81.3
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.0e-34 149.4 149 56.4
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 2.6e-34 149.1 91 80.2
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 4.4e-34 148.3 89 80.9
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 7.5e-34 147.5 90 82.2
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 9.8e-34 147.1 138 59.4
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.7e-33 146.4 121 63.6
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.2e-33 146.0 91 81.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.8e-33 145.6 140 63.6
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.7e-33 145.2 90 78.9
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 4.9e-33 144.8 91 78.0
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 8.3e-33 144.1 89 78.7
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 1.4e-32 143.3 91 75.8
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 3.1e-32 142.1 142 56.3
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.1e-32 142.1 91 80.2
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 4.1e-32 141.7 146 56.8
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 4.1e-32 141.7 142 57.0
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 5.4e-32 141.4 140 57.9
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 7.0e-32 141.0 140 57.9
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 7.0e-32 141.0 140 57.9
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 7.0e-32 141.0 146 56.2
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 7.0e-32 141.0 89 75.3
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.0e-31 139.4 107 68.2
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.7e-31 139.0 146 55.5
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 3.5e-31 138.7 132 58.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 3.5e-31 138.7 132 58.3
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 3.5e-31 138.7 139 56.1
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 4.5e-31 138.3 144 56.9
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 5.9e-31 137.9 90 77.8
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 5.9e-31 137.9 144 54.9
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 5.9e-31 137.9 145 55.9
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 7.7e-31 137.5 137 56.9
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 2.3e-30 136.0 112 62.5
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.8e-30 135.2 91 76.9
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 3.8e-30 135.2 91 74.7
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 6.6e-30 134.4 143 56.6
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 6.6e-30 134.4 144 54.9
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-29 133.7 143 55.2
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.5e-29 133.3 134 59.0
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.5e-29 132.5 89 70.8
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 3.3e-29 132.1 91 69.2
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 5.5e-29 131.3 129 60.5
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.2e-28 130.2 104 62.5
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.2e-28 130.2 101 63.4
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.2e-28 130.2 101 63.4
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.6e-28 129.8 91 73.6
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 2.1e-28 129.4 101 63.4
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 4.7e-28 128.3 84 77.4
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 8.0e-28 127.5 91 71.4
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.4e-27 126.7 83 77.1
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.0e-26 122.9 66 87.9
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 9.8e-26 120.6 66 84.8
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 2.9e-25 119.0 124 53.2
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 2.9e-25 119.0 124 53.2
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 4.9e-25 118.2 75 76.0
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 9.2e-24 114.0 72 75.0
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.6e-23 111.7 71 77.5
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.3e-21 105.5 90 64.4
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 4.0e-19 98.6 98 51.0
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 5.2e-19 98.2 87 62.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 9.2e-16 87.4 48 85.4
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 4.0e-11 72.0 82 50.0
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 4.0e-11 72.0 48 72.9
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 9.8e-10 67.4 83 42.2
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.3e-09 67.0 94 42.6


User provided reference genes

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