Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.5e-75 286.2 152 100.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.6e-32 143.3 139 60.4
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.9e-31 139.0 109 68.8
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.1e-30 137.1 166 53.6
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 1.5e-30 136.7 140 57.9
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.5e-30 136.7 145 58.6
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.9e-30 136.3 137 63.5
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.5e-30 136.0 135 59.3
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 2.5e-30 136.0 139 57.6
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 3.2e-30 135.6 142 58.5
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 4.2e-30 135.2 139 57.6
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.1e-29 132.9 142 57.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 2.7e-29 132.5 142 58.5
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 4.0e-28 128.6 120 62.5
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 6.8e-28 127.9 167 51.5
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 8.8e-28 127.5 167 51.5
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.6e-27 125.9 139 56.8
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.4e-27 125.6 143 56.6
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.4e-27 125.2 168 50.6
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 7.5e-27 124.4 145 55.2
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.3e-26 123.6 106 65.1
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.3e-26 123.6 102 62.7
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.7e-26 123.2 160 52.5
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.2e-26 122.9 132 58.3
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 2.8e-26 122.5 147 50.3
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 3.7e-26 122.1 133 56.4
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.3e-26 120.9 138 55.1
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.4e-25 120.2 145 53.1
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.8e-25 119.8 138 54.3
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 4.1e-25 118.6 108 62.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 4.1e-25 118.6 151 51.7
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 9.1e-25 117.5 132 59.1
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.2e-24 117.1 138 58.0
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.2e-24 117.1 142 55.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 3.5e-24 115.5 133 54.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 7.7e-24 114.4 110 63.6
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.0e-23 114.0 134 57.5
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 1.3e-23 113.6 194 43.3
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.7e-23 113.2 154 48.7
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.9e-23 112.5 141 56.7
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 5.0e-23 111.7 143 50.3
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 6.5e-23 111.3 145 50.3
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.5e-23 111.3 133 52.6
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 3.2e-22 109.0 136 55.1
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 3.2e-22 109.0 156 49.4
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 5.5e-22 108.2 98 67.3
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 7.2e-22 107.8 144 50.0
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 7.2e-22 107.8 148 48.0
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 7.2e-22 107.8 132 55.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 9.5e-22 107.5 144 50.7
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.6e-21 106.7 145 51.7
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.1e-21 106.3 111 57.7
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.6e-21 105.5 141 48.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.6e-21 105.5 143 52.4
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.8e-20 103.2 101 60.4
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 2.3e-20 102.8 161 45.3
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.3e-20 102.8 109 56.9
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 2.3e-20 102.8 109 56.9
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 4.0e-20 102.1 112 58.0
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.2e-19 100.5 124 51.6
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.2e-19 100.5 142 45.1
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.2e-19 100.5 114 53.5
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.5e-19 100.1 120 52.5
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 2.6e-19 99.4 113 54.9
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 3.4e-19 99.0 98 60.2
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.4e-19 99.0 130 51.5
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 7.5e-19 97.8 120 50.0
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 7.5e-19 97.8 133 47.4
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.8e-17 93.2 126 52.4
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 9.2e-17 90.9 110 53.6
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 3.5e-16 89.0 151 44.4
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.5e-16 88.6 127 48.0
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 7.8e-16 87.8 151 43.7
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 7.8e-16 87.8 111 52.3
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.3e-15 86.3 141 46.1
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.1e-14 84.0 139 42.4
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.5e-14 83.6 110 52.7
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.9e-14 83.2 185 37.8
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 3.3e-14 82.4 140 45.0
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 4.3e-14 82.0 144 43.1
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 4.3e-14 82.0 185 37.3
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.6e-13 80.1 133 43.6
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.1e-13 79.7 151 41.7
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 6.1e-13 78.2 149 41.6
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 3.0e-12 75.9 139 43.2
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 4.0e-12 75.5 146 42.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 6.8e-12 74.7 138 37.7
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.2e-11 73.9 146 41.1
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 5.7e-11 71.6 79 51.9
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.3e-10 70.5 111 46.8
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 6.4e-10 68.2 129 44.2
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 2.4e-09 66.2 141 36.9
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 9.2e-09 64.3 125 43.2
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.8e-08 61.2 126 36.5
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.0e-07 60.8 135 37.8
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.3e-07 60.5 109 40.4
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 2.3e-07 59.7 135 38.5
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.3e-07 59.7 143 35.7
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 6.6e-07 58.2 48 60.4
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.1e-06 57.4 135 36.3


User provided reference genes

Program Settings