Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 2.6e-141 505.4 252 100.0
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 3.2e-139 498.4 252 98.4
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 6.0e-90 334.7 236 72.5
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 7.9e-90 334.3 232 72.8
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 5.6e-88 328.2 237 70.5
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 5.6e-88 328.2 248 68.5
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.8e-87 325.9 239 71.5
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 1.2e-85 320.5 246 68.7
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 2.0e-85 319.7 240 67.1
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.0e-85 319.7 237 69.2
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 7.1e-83 311.2 231 69.3
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 3.0e-81 305.8 226 69.0
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 9.7e-80 300.8 226 68.1
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 3.7e-79 298.9 226 67.3
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 2.4e-78 296.2 226 67.7
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 2.4e-78 296.2 231 64.5
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 6.9e-78 294.7 231 64.9
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 5.9e-77 291.6 260 63.1
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 3.8e-76 288.9 232 65.1
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 8.5e-76 287.7 226 66.8
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 8.5e-76 287.7 237 65.4
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.9e-75 286.6 249 59.8
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 9.4e-75 284.3 259 57.5
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 3.6e-74 282.3 254 58.3
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 4.6e-74 282.0 243 60.5
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 6.1e-74 281.6 243 60.5
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 3.9e-73 278.9 233 61.8
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 5.1e-73 278.5 245 61.2
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 3.3e-72 275.8 235 62.1
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 3.3e-72 275.8 238 60.5
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 5.3e-70 268.5 255 58.0
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.3e-70 268.5 261 54.4
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 9.1e-70 267.7 227 62.1
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 4.5e-69 265.4 239 57.3
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.0e-68 264.2 242 58.7
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 1.9e-67 260.0 236 58.5
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 7.2e-67 258.1 233 57.9
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 9.4e-67 257.7 225 61.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.6e-66 256.9 237 58.6
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 2.1e-66 256.5 227 63.0
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 2.7e-66 256.1 236 58.1
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 3.6e-66 255.8 230 60.4
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 1.4e-65 253.8 237 57.8
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 1.8e-65 253.4 234 58.5
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 3.9e-65 252.3 234 58.1
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 3.9e-65 252.3 234 58.1
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 3.9e-65 252.3 266 52.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 5.1e-65 251.9 246 55.7
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 6.7e-65 251.5 232 55.6
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 8.8e-65 251.1 243 56.0
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.5e-64 250.4 235 58.3
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.0e-64 250.0 231 58.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 2.6e-64 249.6 232 55.6
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 2.6e-64 249.6 264 52.3
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 5.7e-64 248.4 242 58.3
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 9.7e-64 247.7 245 56.7
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.3e-63 247.3 232 55.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 2.8e-63 246.1 228 55.7
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 2.8e-63 246.1 241 55.2
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 4.8e-63 245.4 229 55.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 6.3e-63 245.0 243 56.4
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 3.1e-62 242.7 230 55.7
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 3.1e-62 242.7 245 53.1
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.1e-62 242.7 235 52.8
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 1.2e-61 240.7 243 55.1
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.5e-61 239.2 254 51.6
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 5.9e-61 238.4 233 56.7
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.0e-60 237.7 239 53.6
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 5.0e-60 235.3 253 50.6
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 5.0e-60 235.3 255 50.6
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.0e-60 235.3 300 45.3
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 8.5e-60 234.6 252 52.0
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 3.2e-59 232.6 272 50.0
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 7.2e-59 231.5 260 46.9
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 9.4e-59 231.1 253 50.6
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 3.6e-58 229.2 240 52.1
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 8.0e-58 228.0 229 53.3
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 1.8e-57 226.9 231 55.0
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.7e-56 221.9 210 54.3
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.8e-47 193.0 240 47.5
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 3.1e-46 189.5 264 43.9
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.9e-44 183.0 158 65.2
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 2.9e-44 183.0 236 48.7
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 6.1e-42 175.3 131 66.4
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.0e-41 172.9 288 36.5
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.0e-41 172.9 247 42.1
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 7.5e-40 168.3 295 37.3
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 9.8e-40 167.9 247 41.7
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.6e-37 160.6 323 32.8
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 7.7e-37 158.3 238 40.8
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.9e-35 153.7 141 57.4
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 3.3e-35 152.9 169 53.3
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 7.2e-35 151.8 141 56.7
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 8.9e-33 144.8 190 48.4
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 4.1e-30 136.0 245 37.6
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 2.7e-29 133.3 101 63.4
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 1.3e-28 131.0 98 67.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 2.9e-28 129.8 97 69.1
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 5.0e-28 129.0 144 47.9
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 6.0e-21 105.5 182 38.5
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 1.6e-18 97.4 97 50.5
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.3e-17 93.6 143 40.6
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 1.4e-14 84.3 56 78.6
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 1.9e-11 73.9 220 25.5
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 6.4e-07 58.9 108 34.3
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 1.4e-06 57.8 249 24.5
Cpa.g.sc28.27 Carica papaya HOM05D007273 ORTHO05D009230 2.4e-06 57.0 60 56.7
arahy.Tifrunner.gnm1.ann1.6A6QM9 Arachis hypogaea HOM05D007003 ORTHO05D008499 3.2e-06 56.6 76 35.5


User provided reference genes

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