Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2669 Cannabis sativa HOM05D000716 ORTHO05D008300 1.6e-104 382.9 208 100.0
CANSAT80G0647 Cannabis sativa HOM05D000716 ORTHO05D008300 8.5e-98 360.5 201 95.5
FAN03G0513 Fragaria x ananassa HOM05D000716 ORTHO05D008300 7.3e-41 171.4 200 49.0
FAN06G4889 Fragaria x ananassa HOM05D000716 ORTHO05D008300 1.1e-39 167.5 200 48.0
RcHm_v2.0_Chr1g0321131 Rosa chinensis HOM05D000716 ORTHO05D008300 1.2e-38 164.1 200 47.5
FvH4_7g02490 Fragaria vesca HOM05D000716 ORTHO05D008300 1.5e-38 163.7 200 47.0
MD02G1293000 Malus domestica HOM05D000716 ORTHO05D008300 4.4e-38 162.2 197 47.2
MD07G1034100 Malus domestica HOM05D000716 ORTHO05D008300 3.7e-37 159.1 197 49.7
Prupe.2G030600 Prunus persica HOM05D000716 ORTHO05D008300 8.3e-37 157.9 197 48.2
QL04p014065 Quercus lobata HOM05D000716 ORTHO05D008300 4.1e-36 155.6 197 47.7
TWI63G0606 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 9.5e-33 144.4 217 39.6
TAR623G0975 Trochodendron aralioides HOM05D000716 ORTHO05D008300 2.8e-32 142.9 195 41.0
Potri.003G201000 Populus trichocarpa HOM05D000716 ORTHO05D008300 4.7e-32 142.1 213 40.8
Glyma.11G152500 Glycine max HOM05D000716 ORTHO05D008300 1.1e-31 141.0 203 40.9
TWI38G2247 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 1.8e-31 140.2 217 39.6
CiPaw.13G011200 Carya illinoinensis HOM05D000716 ORTHO05D008300 5.2e-31 138.7 199 42.2
COL.COLO4_35450 Corchorus olitorius HOM05D000716 ORTHO05D008300 6.8e-31 138.3 215 39.1
VMungo1080G1793 Vigna mungo HOM05D000716 ORTHO05D008300 6.8e-31 138.3 201 42.3
Nn7g36514 Nelumbo nucifera HOM05D000716 ORTHO05D008300 1.5e-30 137.1 199 39.7
Sabra01G0018300 Salix brachista HOM05D000716 ORTHO05D008300 2.0e-30 136.7 209 41.6
PGR031G0769 Punica granatum HOM05D000716 ORTHO05D008300 4.4e-30 135.6 199 42.7
Sabra03G0148600 Salix brachista HOM05D000716 ORTHO05D008300 5.8e-30 135.2 211 37.9
ClCG05G020740 Citrullus lanatus HOM05D000716 ORTHO05D008300 2.2e-29 133.3 199 38.2
Ciclev10030698m.g Citrus clementina HOM05D000716 ORTHO05D008300 2.2e-29 133.3 208 39.4
Potri.001G024600 Populus trichocarpa HOM05D000716 ORTHO05D008300 3.8e-29 132.5 213 39.9
Atru.chr11.2438 Acer truncatum HOM05D000716 ORTHO05D008300 4.9e-29 132.1 218 36.7
Duzib114G0335 Durio zibethinus HOM05D000716 ORTHO05D008300 1.1e-28 131.0 204 38.2
Eucgr.G03250 Eucalyptus grandis HOM05D000716 ORTHO05D008300 1.4e-28 130.6 200 39.0
CsaV3_5G014750 Cucumis sativus L. HOM05D000716 ORTHO05D008300 1.9e-28 130.2 199 39.7
Sed0026818 Sechium edule HOM05D000716 ORTHO05D008300 4.2e-28 129.0 200 37.0
Lalb_Chr25g0282321 Lupinus albus HOM05D000716 ORTHO05D008300 1.2e-27 127.5 201 40.8
Medtr3g019360 Medicago truncatula HOM05D000716 ORTHO05D008300 2.7e-27 126.3 199 38.2
MELO3C015024.2 Cucumis melo HOM05D000716 ORTHO05D008300 6.0e-27 125.2 200 38.5
TPR.G3874 Trifolium pratense HOM05D000716 ORTHO05D008300 7.8e-27 124.8 196 36.7
Duzib128G1102 Durio zibethinus HOM05D000716 ORTHO05D008300 1.3e-26 124.0 208 37.5
Dinv32042 Davidia involucrata HOM05D000716 ORTHO05D008300 1.7e-26 123.6 207 41.5
Lj3g0026059 Lotus japonicus HOM05D000716 ORTHO05D008300 1.1e-25 120.9 197 39.1
Ca_04529_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 3.3e-25 119.4 196 35.7
Ca_30978_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 3.3e-25 119.4 196 35.7
Lj3g0003771 Lotus japonicus HOM05D000716 ORTHO05D008300 1.2e-24 117.5 198 38.4
Dinv01120 Davidia involucrata HOM05D000716 ORTHO05D008300 8.1e-24 114.8 190 42.1
Gorai.011G212500 Gossypium raimondii HOM05D000716 ORTHO05D008300 8.1e-24 114.8 218 33.5
Psat5g217360 Pisum sativum HOM05D000716 ORTHO05D008300 2.4e-23 113.2 195 36.4
Gohir.D10G189200 Gossypium hirsutum HOM05D000716 ORTHO05D008300 3.1e-23 112.8 218 33.0
AUR62026832 Chenopodium quinoa HOM05D000716 ORTHO05D008300 4.0e-23 112.5 197 36.0
Gohir.A10G182500 Gossypium hirsutum HOM05D000716 ORTHO05D008300 4.0e-23 112.5 218 33.0
AUR62037220 Chenopodium quinoa HOM05D000716 ORTHO05D008300 6.9e-23 111.7 196 34.7
Thecc.10G170700 Theobroma cacao HOM05D000716 ORTHO05D008300 6.9e-23 111.7 215 35.8
Hund13334 Selenicereus undatus HOM05D000716 ORTHO05D008300 9.0e-23 111.3 194 35.6
Haze_03060 Corylus avellana HOM05D000716 ORTHO05D008300 1.5e-22 110.5 138 44.9
Sc10g0004290 Simmondsia chinensis HOM05D000716 ORTHO05D008300 1.5e-22 110.5 195 35.4
DCAR_031825 Daucus carota HOM05D000716 ORTHO05D008300 1.7e-21 107.1 195 34.4
EL10Ac2g02846 Beta vulgaris HOM05D000716 ORTHO05D008300 4.9e-21 105.5 200 35.0
Ah.10g030790 Amaranthus hybridus HOM05D000716 ORTHO05D008300 1.2e-19 100.9 205 37.6
arahy.Tifrunner.gnm1.ann1.G6Z95W Arachis hypogaea HOM05D000716 ORTHO05D008300 4.6e-19 99.0 196 33.2
arahy.Tifrunner.gnm1.ann1.FKA8YF Arachis hypogaea HOM05D000716 ORTHO05D008300 7.8e-19 98.2 196 32.7
PSO384G1427 Papaver somniferum HOM05D000716 ORTHO05D008300 1.0e-18 97.8 163 34.4
PSO339G0025 Papaver somniferum HOM05D000716 ORTHO05D008300 8.7e-18 94.7 174 32.8
Manes.11G003600 Manihot esculenta HOM05D000716 ORTHO05D008300 5.6e-17 92.0 202 35.1
Cc02_g30350 Coffea canephora HOM05D000716 ORTHO05D008300 1.6e-16 90.5 191 33.0
MBI19_g23016_MAGBIO Magnolia biondii HOM05D000716 ORTHO05D008300 6.2e-16 88.6 194 34.0
SalBow6G2938 Salvia bowleyana HOM05D000716 ORTHO05D008300 6.9e-15 85.1 175 30.9
Actinidia06267 Actinidia chinensis HOM05D000716 ORTHO05D008300 4.5e-14 82.4 201 35.8
MSTRG.20529 Avicennia marina HOM05D000716 ORTHO05D008300 1.7e-13 80.5 161 31.1
vmacro13734 Vaccinium macrocarpon HOM05D000716 ORTHO05D008300 2.9e-13 79.7 181 32.0
Actinidia14086 Actinidia chinensis HOM05D000716 ORTHO05D008300 8.4e-13 78.2 165 35.8
Oeu056564.1 Olea europaea HOM05D000716 ORTHO05D008300 5.4e-12 75.5 213 31.0
Lsat_1_v5_gn_4_29860 Lactuca sativa HOM05D000716 ORTHO05D008300 7.1e-12 75.1 197 37.1
Aqoxy1G00338 Aquilegia oxysepala HOM05D000716 ORTHO05D008300 2.1e-11 73.6 204 29.4
HanXRQChr16g0525331 Helianthus annuus HOM05D000716 ORTHO05D008300 2.1e-11 73.6 142 35.9
Rhsim07G0063200 Rhododendron simsii HOM05D000716 ORTHO05D008300 2.7e-11 73.2 141 37.6
ATR0721G009 Amborella trichopoda HOM05D000716 ORTHO05D008300 4.6e-11 72.4 142 33.8
Migut.N01827 Erythranthe guttata HOM05D000716 ORTHO05D008300 1.3e-10 70.9 104 35.6
SGA_v2.0_scaffold5G02929 Striga asiatica HOM05D000716 ORTHO05D008300 1.3e-10 70.9 177 28.8
ECA234G3719 Erigeron canadensis HOM05D000716 ORTHO05D008300 1.8e-10 70.5 162 35.8
Peaxi162Scf00309g00334 Petunia axillaris HOM05D000716 ORTHO05D008300 1.8e-10 70.5 166 31.9
MSTRG.5059 Avicennia marina HOM05D000716 ORTHO05D008300 1.9e-09 67.0 132 30.3
Oeu003919.1 Olea europaea HOM05D000716 ORTHO05D008300 5.6e-09 65.5 151 35.8
Actinidia19449 Actinidia chinensis HOM05D000716 ORTHO05D008300 2.1e-08 63.5 107 40.2
Nitab4.5_0000316g0100 Nicotiana tabacum HOM05D000716 ORTHO05D008300 2.4e-07 60.1 198 29.8
Nitab4.5_0001888g0050 Nicotiana tabacum HOM05D000716 ORTHO05D008300 2.4e-07 60.1 161 34.2
SMO364G0870 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 4.0e-07 59.3 140 29.3
SEGI_29821 Sequoiadendron giganteum HOM05D000716 ORTHO05D004822 4.0e-07 59.3 140 27.9


User provided reference genes

Program Settings