Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 0.0e+00 1389.8 702 100.0
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 0.0e+00 1277.7 702 93.2
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 2.2e-238 829.3 705 61.3
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 5.0e-235 818.1 704 60.1
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 1.9e-234 816.2 705 60.4
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.8e-232 809.7 718 59.3
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 2.2e-230 802.7 746 56.4
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 4.9e-230 801.6 710 60.1
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 8.3e-230 800.8 708 60.2
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 1.4e-229 800.0 707 59.8
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.8e-229 799.7 710 60.1
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 3.5e-228 795.4 716 57.5
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 1.2e-225 786.9 712 57.2
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 8.0e-225 784.3 722 57.3
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 6.4e-222 774.6 713 57.1
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 1.4e-221 773.5 742 55.3
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 1.4e-221 773.5 710 56.8
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 8.0e-217 757.7 713 55.5
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 5.2e-216 755.0 713 55.1
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.9e-213 746.5 721 54.8
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 3.2e-213 745.7 713 54.7
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 2.0e-212 743.0 656 59.9
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 2.0e-212 743.0 721 55.3
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 5.2e-208 728.4 720 53.5
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.9e-205 719.9 722 52.8
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 8.6e-203 711.1 718 53.8
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.5e-202 710.3 716 54.3
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 1.2e-201 707.2 717 53.6
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 1.8e-200 703.4 718 52.6
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 3.1e-200 702.6 719 52.9
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 3.1e-200 702.6 648 56.0
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 2.6e-199 699.5 718 52.9
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 2.6e-199 699.5 685 54.3
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 9.9e-199 697.6 705 52.2
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 8.4e-198 694.5 719 52.9
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 4.6e-196 688.7 716 51.7
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 2.3e-195 686.4 704 52.7
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.5e-194 683.7 709 50.9
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 2.5e-194 682.9 718 51.7
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 5.6e-194 681.8 724 52.1
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.2e-193 680.6 530 64.3
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 2.1e-193 679.9 708 52.4
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 2.4e-192 676.4 726 50.3
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 1.5e-191 673.7 719 50.6
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 3.4e-191 672.5 716 50.0
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 8.4e-190 667.9 710 50.4
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 8.4e-190 667.9 710 50.4
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 1.4e-189 667.2 720 51.1
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 3.2e-189 666.0 710 50.4
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.1e-188 663.3 725 50.8
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 8.7e-187 657.9 716 49.9
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 1.5e-186 657.1 709 49.8
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 7.3e-186 654.8 709 52.9
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 9.6e-186 654.4 707 50.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 9.9e-183 644.4 720 48.8
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.3e-182 644.0 651 53.0
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 4.9e-182 642.1 716 49.3
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.9e-181 640.2 529 60.9
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.2e-180 637.5 536 59.7
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 4.6e-180 635.6 677 49.6
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 4.6e-180 635.6 716 48.9
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 2.3e-179 633.3 722 48.6
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 3.0e-179 632.9 720 48.9
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 8.7e-179 631.3 728 48.4
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 1.1e-178 630.9 652 52.8
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 1.6e-177 627.1 645 50.7
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 2.8e-177 626.3 716 49.2
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 4.8e-177 625.5 675 49.6
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 4.8e-177 625.5 728 47.7
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 6.9e-176 621.7 645 50.9
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 2.6e-175 619.8 715 46.9
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 3.4e-175 619.4 722 48.1
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 2.9e-174 616.3 674 49.6
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 6.0e-172 608.6 725 47.2
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.8e-171 607.1 771 44.6
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 5.6e-170 602.1 711 47.3
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 7.4e-170 601.7 531 59.1
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.5e-167 594.0 719 46.7
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 1.7e-166 590.5 729 47.2
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 2.1e-164 583.6 773 44.8
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 6.0e-164 582.0 781 45.6
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 6.7e-163 578.6 681 48.0
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 1.9e-162 577.0 643 49.1
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 9.7e-162 574.7 553 55.7
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 2.6e-159 566.6 526 54.2
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 6.5e-158 562.0 526 54.0
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.3e-155 554.3 531 52.4
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 5.1e-155 552.4 684 47.1
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 1.5e-154 550.8 533 52.5
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 1.9e-154 550.4 524 54.2
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 3.3e-154 549.7 681 47.0
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 3.7e-153 546.2 592 50.0
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 6.9e-152 542.0 505 58.2
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 6.1e-148 528.9 535 52.9
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 1.7e-134 484.2 660 44.1
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 5.2e-131 472.6 743 38.1
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.4e-128 464.5 694 40.2
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.8e-128 464.2 719 39.9
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 1.7e-126 457.6 502 52.0
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 4.4e-122 443.0 455 55.8
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 3.1e-120 436.8 365 61.4
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 1.3e-118 431.4 439 54.7
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 7.2e-117 425.6 731 37.3
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 4.1e-112 409.8 590 39.5
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 7.8e-95 352.4 702 34.8
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.4e-91 341.7 789 33.1
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 1.5e-82 311.6 730 31.9
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 9.9e-82 308.9 738 31.4
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 4.9e-81 306.6 229 69.9
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 9.6e-69 265.8 635 32.3
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 7.9e-63 246.1 193 64.8
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 1.4e-59 235.3 545 31.0
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.7e-57 228.4 256 52.3
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 3.2e-48 197.6 281 44.5
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 5.5e-48 196.8 148 66.2
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 1.0e-46 192.6 222 50.9
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 1.8e-43 181.8 204 43.6
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-39 168.3 258 37.6
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 5.7e-37 160.2 142 60.6
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 3.4e-34 151.0 210 42.9
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 2.2e-25 121.7 146 43.2
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 8.5e-25 119.8 111 51.4
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.6e-23 115.5 397 28.2
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 8.0e-23 113.2 241 33.6
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 8.0e-23 113.2 241 33.6
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.4e-22 112.5 97 54.6
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 5.2e-22 110.5 266 33.5
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 4.2e-16 90.9 92 50.0
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.2e-15 89.4 95 43.2
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 4.1e-11 74.3 93 44.1
BcaB05g24338 Brassica carinata HOM05D005891 ORTHO05D007214 1.2e-10 72.8 87 51.7
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.3e-09 69.3 66 45.5


User provided reference genes

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