Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 1.5e-133 479.6 245 100.0
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.0e-78 295.8 245 60.8
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 3.0e-78 295.8 245 59.2
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 6.7e-78 294.7 245 60.4
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.8e-76 288.5 245 59.2
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.8e-76 288.5 245 59.6
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 3.2e-72 275.8 245 57.1
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.2e-72 275.8 245 57.6
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 5.5e-72 275.0 242 57.9
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 5.5e-72 275.0 240 59.2
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 3.6e-71 272.3 245 56.7
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.8e-70 270.0 245 55.9
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.8e-70 270.0 245 56.7
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.3e-70 269.6 245 56.7
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 8.8e-70 267.7 245 56.3
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 1.2e-69 267.3 245 58.4
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 2.0e-69 266.5 245 55.9
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.0e-69 266.5 246 56.9
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 1.3e-68 263.8 245 55.9
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 2.8e-68 262.7 245 54.7
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 9.1e-67 257.7 246 54.9
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 6.5e-65 251.5 245 52.7
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 8.5e-65 251.1 245 52.7
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.9e-64 250.0 245 52.2
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 4.2e-64 248.8 245 53.1
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.7e-63 245.4 245 54.7
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 8.8e-62 241.1 237 51.5
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 1.5e-61 240.4 241 52.7
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 9.8e-61 237.7 246 52.8
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.7e-60 236.9 244 48.4
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 1.7e-60 236.9 271 46.5
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.8e-59 233.4 242 52.1
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.4e-59 233.0 245 49.8
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 4.1e-59 232.3 244 47.5
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 9.1e-59 231.1 244 48.8
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 3.5e-58 229.2 242 50.8
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 3.5e-58 229.2 190 61.1
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 5.9e-58 228.4 249 51.0
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 5.9e-58 228.4 244 48.4
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.0e-57 227.6 245 49.0
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 1.0e-57 227.6 244 48.4
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 2.3e-57 226.5 241 49.0
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 2.3e-57 226.5 248 50.0
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 2.3e-57 226.5 240 50.8
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 3.8e-57 225.7 241 50.2
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 8.6e-57 224.6 239 49.4
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.5e-56 223.8 241 48.1
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 3.2e-56 222.6 242 50.4
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 4.2e-56 222.2 245 46.1
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 2.1e-55 219.9 242 47.9
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 4.7e-55 218.8 243 49.0
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 1.0e-54 217.6 255 47.5
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.4e-54 217.2 241 46.1
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 3.0e-54 216.1 245 49.4
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 3.0e-54 216.1 245 49.0
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.0e-54 216.1 245 45.7
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 4.0e-54 215.7 249 48.2
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 4.0e-54 215.7 238 48.3
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 4.0e-54 215.7 235 46.0
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 5.2e-54 215.3 245 46.5
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 1.2e-53 214.2 245 49.0
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 1.5e-53 213.8 249 47.4
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 2.0e-53 213.4 237 46.8
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 4.4e-53 212.2 247 48.6
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 5.7e-53 211.8 242 47.9
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 4.9e-52 208.8 242 45.9
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 6.3e-52 208.4 252 47.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 6.3e-52 208.4 178 56.7
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 2.4e-51 206.5 232 47.8
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 5.4e-51 205.3 261 46.0
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 2.0e-50 203.4 248 45.6
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 1.7e-49 200.3 240 46.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 2.9e-49 199.5 259 43.6
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 9.5e-48 194.5 247 44.9
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.2e-47 194.1 238 46.2
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 4.7e-47 192.2 248 44.0
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 6.8e-46 188.3 216 47.7
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 4.4e-45 185.7 244 45.1
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 7.5e-45 184.9 244 45.1
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 4.9e-44 182.2 244 44.7
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 7.0e-43 178.3 238 43.7
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 7.0e-43 178.3 226 44.7
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 9.2e-43 177.9 226 44.7
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 2.0e-42 176.8 217 44.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 2.0e-42 176.8 252 44.0
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.5e-40 170.6 236 41.9
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.5e-40 169.9 260 41.2
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 3.3e-40 169.5 216 43.5
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 2.1e-39 166.8 248 42.3
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 2.1e-39 166.8 245 43.7
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 3.6e-39 166.0 238 41.2
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 4.0e-38 162.5 244 38.5
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 2.2e-36 156.8 176 50.0
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 2.9e-36 156.4 179 44.1
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 2.4e-35 153.3 245 39.2
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 3.2e-35 152.9 247 38.9
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 5.4e-35 152.1 178 46.1
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 7.0e-35 151.8 200 40.5
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.0e-33 147.9 240 39.6
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 1.7e-33 147.1 245 38.4
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 3.9e-33 146.0 243 38.3
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 3.3e-32 142.9 237 36.7
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 2.3e-30 136.7 144 51.4
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 2.6e-29 133.3 137 51.1
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.9e-28 129.0 144 50.0
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 2.5e-24 116.7 204 34.8
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 1.5e-21 107.5 76 68.4
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 9.9e-21 104.8 249 30.5
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 2.2e-20 103.6 203 31.5
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.2e-18 97.8 143 37.1
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 4.3e-16 89.4 59 71.2
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 4.7e-15 85.9 137 38.7
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 8.1e-15 85.1 60 66.7
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 4.4e-13 79.3 106 44.3
COL.COLO4_24165 Corchorus olitorius HOM05D006386 ORTHO05D007575 8.4e-12 75.1 62 62.9
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.0e-09 68.2 40 77.5
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 6.6e-09 65.5 188 25.0
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.5e-08 64.3 38 76.3
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 5.6e-08 62.4 41 65.9
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.6e-07 60.8 104 37.5


User provided reference genes

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