Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 7.1e-119 430.6 221 100.0
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.8e-34 150.2 331 37.5
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 9.2e-34 147.9 356 36.0
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.8e-29 133.7 307 36.5
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 2.3e-29 133.3 334 33.5
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 2.3e-29 133.3 288 34.7
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 2.0e-28 130.2 339 33.6
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.2e-25 120.9 340 31.2
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 1.6e-25 120.6 254 37.4
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 1.6e-25 120.6 330 32.7
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.0e-25 120.2 331 32.3
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 2.7e-25 119.8 316 33.9
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 4.6e-25 119.0 321 34.3
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.3e-24 117.5 310 34.5
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 1.1e-23 114.4 327 33.0
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.3e-23 112.5 322 32.3
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.3e-23 112.5 322 33.2
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.6e-22 110.5 309 31.7
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 2.8e-22 109.8 251 38.6
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 1.1e-21 107.8 319 30.4
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 1.1e-21 107.8 331 31.1
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 3.1e-21 106.3 277 34.7
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.5e-20 104.0 330 31.2
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 2.6e-20 103.2 327 30.6
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 9.8e-20 101.3 334 29.9
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 1.7e-19 100.5 335 31.3
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 1.7e-19 100.5 309 31.4
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 2.2e-19 100.1 250 34.4
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 2.2e-19 100.1 342 29.2
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 2.9e-19 99.8 93 58.1
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 3.7e-19 99.4 249 35.7
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 3.9e-16 89.4 307 29.0
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.5e-15 87.4 356 27.2
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.9e-15 87.0 316 29.7
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 2.5e-15 86.7 253 33.2
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 9.5e-15 84.7 260 30.4
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.6e-14 84.0 337 28.8
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 2.8e-14 83.2 95 50.5
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 4.7e-14 82.4 336 28.6
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 8.1e-14 81.6 207 29.0
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 1.1e-13 81.3 141 37.6
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.4e-13 80.9 348 27.3
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 4.0e-13 79.3 65 56.9
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 4.0e-13 79.3 296 30.7
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 4.0e-13 79.3 144 38.9
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 1.5e-12 77.4 176 34.7
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 3.4e-12 76.3 93 48.4
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.7e-11 73.9 124 44.4
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 2.2e-11 73.6 95 45.3
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 8.4e-11 71.6 110 40.9
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 7.1e-10 68.6 134 38.1
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 7.8e-09 65.1 96 43.8
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.0e-08 64.7 96 43.8
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 1.7e-08 63.9 57 57.9
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 2.3e-08 63.5 41 65.9
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 3.9e-08 62.8 77 48.1
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 6.6e-08 62.0 96 42.7
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 4.3e-07 59.3 52 53.8
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 4.3e-07 59.3 52 53.8


User provided reference genes

Program Settings