Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2560 Cannabis sativa HOM05D008897 ORTHO05D000137 5.5e-248 860.5 440 100.0
CANSAT35G1468 Cannabis sativa HOM05D008897 ORTHO05D000137 7.7e-141 504.6 413 67.3
CANSAT56G3280 Cannabis sativa HOM05D008897 ORTHO05D000137 2.9e-140 502.7 313 84.0
CANSAT21G1153 Cannabis sativa HOM05D008897 ORTHO05D000137 4.1e-134 482.3 366 71.3
CANSAT21G0297 Cannabis sativa HOM05D008897 ORTHO05D014793 2.2e-132 476.5 499 57.3
CANSAT01G2866 Cannabis sativa HOM05D008897 ORTHO05D014793 2.2e-127 459.9 365 68.5
CANSAT56G0181 Cannabis sativa HOM05D008897 ORTHO05D014793 2.2e-119 433.3 362 68.0
CANSAT01G1225 Cannabis sativa HOM05D008897 ORTHO05D000482 4.8e-119 432.2 351 70.4
CANSAT21G0433 Cannabis sativa HOM05D008897 ORTHO05D000016 1.8e-113 413.7 205 98.0
ATR0614G001 Amborella trichopoda HOM05D008897 ORTHO05D014793 2.0e-104 383.6 289 74.0
CANSAT80G0664 Cannabis sativa HOM05D008897 ORTHO05D000137 3.0e-100 369.8 180 97.8
CANSAT01G2590 Cannabis sativa HOM05D008897 ORTHO05D000137 7.6e-88 328.6 158 98.7
CANSAT54G2287 Cannabis sativa HOM05D008897 ORTHO05D000482 1.7e-84 317.4 284 66.2
CANSAT54G0249 Cannabis sativa HOM05D008897 ORTHO05D000137 4.4e-80 302.8 142 100.0
CANSAT78G1896 Cannabis sativa HOM05D008897 ORTHO05D000137 4.9e-79 299.3 142 98.6
CANSAT21G1145 Cannabis sativa HOM05D008897 ORTHO05D014793 1.4e-73 281.2 287 60.6
CANSAT21G2611 Cannabis sativa HOM05D008897 ORTHO05D014793 6.4e-63 245.7 303 50.5
CANSAT80G2874 Cannabis sativa HOM05D008897 ORTHO05D000137 2.4e-62 243.8 126 94.4
CANSAT78G2148 Cannabis sativa HOM05D008897 ORTHO05D000137 5.4e-62 242.7 112 99.1
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 9.0e-49 198.7 94 94.7
CANSAT25G3286 Cannabis sativa HOM05D008897 ORTHO05D014793 6.5e-47 192.6 241 52.3
CANSAT80G1533 Cannabis sativa HOM05D008897 ORTHO05D014793 1.3e-44 184.9 147 72.1
CANSAT80G0974 Cannabis sativa HOM05D008897 ORTHO05D000482 1.1e-35 155.2 252 45.2
CANSAT21G1699 Cannabis sativa HOM05D008897 ORTHO05D014793 2.5e-35 154.1 209 48.8
CANSAT54G0327 Cannabis sativa HOM05D008897 ORTHO05D113836 2.5e-35 154.1 147 63.3
CANSAT25G3352 Cannabis sativa HOM05D008897 ORTHO05D000482 6.7e-28 129.4 136 60.3
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-26 122.9 137 50.4
CANSAT35G1986 Cannabis sativa HOM05D008897 ORTHO05D014793 4.1e-25 120.2 184 46.7
CANSAT64G1565 Cannabis sativa HOM05D008897 ORTHO05D000482 3.5e-24 117.1 133 56.4
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-21 108.2 197 35.0
CANSAT80G0449 Cannabis sativa HOM05D008721 ORTHO05D000137 2.7e-21 107.5 197 35.0
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 6.1e-21 106.3 254 30.7
CANSAT56G2085 Cannabis sativa HOM05D008897 ORTHO05D014793 8.0e-21 105.9 161 47.2
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 1.0e-20 105.5 268 31.7
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-20 104.8 255 31.8
CANSAT01G3033 Cannabis sativa HOM05D008721 ORTHO05D000137 6.7e-20 102.8 149 38.3
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 3.3e-19 100.5 149 38.3
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 7.5e-19 99.4 271 30.6
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 3.1e-17 94.0 264 30.7
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 4.1e-17 93.6 211 33.6
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-16 91.7 155 38.7
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 89.7 155 38.1
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 89.7 155 38.1
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 89.7 155 38.1
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.0e-15 89.0 147 38.8
CANSAT25G1366 Cannabis sativa HOM05D008636 ORTHO05D000137 2.2e-15 87.8 155 37.4
CANSAT11G1365 Cannabis sativa HOM05D008636 ORTHO05D000137 2.9e-15 87.4 98 40.8
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 2.5e-14 84.3 238 31.5
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 2.5e-14 84.3 156 37.2
CANSAT01G2792 Cannabis sativa HOM05D008636 ORTHO05D000137 4.0e-12 77.0 110 40.0
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 4.0e-12 77.0 110 40.0
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 4.0e-12 77.0 110 40.0
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-10 72.0 103 38.8
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 3.7e-10 70.5 70 50.0
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 1.1e-09 68.9 166 29.5
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 1.4e-09 68.6 189 29.1
CANSAT80G0147 Cannabis sativa HOM05D017160 ORTHO05D000137 2.4e-09 67.8 166 28.9
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 3.1e-09 67.4 70 48.6
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 4.1e-09 67.0 71 46.5
CANSAT80G0461 Cannabis sativa HOM05D008721 ORTHO05D000137 5.4e-09 66.6 56 66.1
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 9.1e-09 65.9 70 47.1
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 1.6e-08 65.1 170 31.2
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 1.6e-08 65.1 271 29.2
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 1.6e-08 65.1 271 29.2
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-08 64.7 159 31.4
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 2.0e-08 64.7 118 33.9
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-08 63.9 70 47.1
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 4.5e-08 63.5 272 25.7
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 4.5e-08 63.5 144 30.6
Sopen00g005360 Solanum pennellii HOM05D000541 ORTHO05D000137 5.9e-08 63.2 178 29.8
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 5.9e-08 63.2 178 30.3
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 5.9e-08 63.2 70 45.7
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 62.0 87 37.9
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 62.0 158 30.4
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 62.0 158 30.4
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 62.0 158 30.4
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-07 62.0 158 30.4
CANSAT54G0650 Cannabis sativa HOM05D008721 ORTHO05D000482 2.2e-07 61.2 196 27.6
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 2.9e-07 60.8 210 28.6
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-07 59.3 80 41.2
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.5e-07 59.3 132 27.3
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.5e-07 59.3 87 35.6
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 1.5e-06 58.5 165 30.3
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.9e-06 58.2 161 29.2
PGSC0003DMG400044701 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.9e-06 58.2 167 30.5
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-06 57.4 170 30.0
Nitab4.5_0007904g0010 Nicotiana tabacum HOM05D008636 ORTHO05D000137 3.2e-06 57.4 142 31.7
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-06 57.4 87 35.6
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 57.0 88 33.0
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-06 57.0 154 25.3
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-06 57.0 154 25.3
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-06 57.0 154 25.3
CAN.G1316.3 Capsicum annuum HOM05D000679 ORTHO05D000137 5.5e-06 56.6 80 41.2
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.5e-06 56.6 94 37.2
DCAR_018395 Daucus carota HOM05D000679 ORTHO05D000137 7.2e-06 56.2 188 26.6
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.4e-06 55.8 135 25.9
SGA_v2.0_scaffold240G44055 Striga asiatica HOM05D000679 ORTHO05D000137 9.4e-06 55.8 118 35.6
SGA_v2.0_scaffold2G00971 Striga asiatica HOM05D000679 ORTHO05D000137 9.4e-06 55.8 113 31.9


User provided reference genes

Program Settings