Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2552 Cannabis sativa HOM05D000051 ORTHO05D010453 5.9e-118 427.6 219 100.0
CANSAT80G2327 Cannabis sativa HOM05D000051 ORTHO05D010453 1.7e-80 303.1 220 75.0
CANSAT80G1164 Cannabis sativa HOM05D000051 ORTHO05D010453 1.4e-74 283.5 215 71.6
CANSAT80G2918 Cannabis sativa HOM05D000051 ORTHO05D010453 1.1e-63 247.3 215 65.6
CANSAT80G2121 Cannabis sativa HOM05D000051 ORTHO05D010453 3.2e-63 245.7 217 64.5
CANSAT80G0872 Cannabis sativa HOM05D000051 ORTHO05D010453 2.8e-43 179.5 215 53.0
CANSAT80G0468 Cannabis sativa HOM05D000051 ORTHO05D010453 3.7e-43 179.1 215 53.0
CANSAT80G2743 Cannabis sativa HOM05D000051 ORTHO05D010453 3.7e-43 179.1 219 53.4
CANSAT80G0613 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-41 173.7 220 50.5
CANSAT80G2502 Cannabis sativa HOM05D000051 ORTHO05D010453 5.5e-39 165.2 217 49.3
CANSAT80G0656 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-38 164.1 214 50.0
CANSAT80G1127 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-38 163.7 216 49.5
CANSAT80G0894 Cannabis sativa HOM05D000051 ORTHO05D010453 4.8e-35 152.1 220 49.5
CANSAT54G1896 Cannabis sativa HOM05D000051 ORTHO05D010453 8.2e-35 151.4 221 47.5
CANSAT80G0772 Cannabis sativa HOM05D000051 ORTHO05D010453 1.4e-34 150.6 229 47.6
CANSAT80G1555 Cannabis sativa HOM05D000051 ORTHO05D010453 3.1e-34 149.4 228 48.7
CANSAT54G2522 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-33 147.1 220 47.7
CANSAT54G2718 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-33 147.1 229 46.7
CANSAT56G3036 Cannabis sativa HOM05D000051 ORTHO05D010453 2.0e-33 146.7 210 48.1
CANSAT54G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 3.5e-33 146.0 211 48.8
CANSAT80G2895 Cannabis sativa HOM05D000051 ORTHO05D010453 7.7e-33 144.8 226 46.0
CANSAT80G1807 Cannabis sativa HOM05D000051 ORTHO05D010453 1.7e-32 143.7 218 45.9
CANSAT80G1381 Cannabis sativa HOM05D000051 ORTHO05D010453 6.5e-32 141.7 224 46.0
CANSAT54G1220 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-31 140.6 218 45.9
CANSAT54G0844 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-31 139.8 218 45.9
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 5.5e-31 138.7 218 46.8
CANSAT80G2757 Cannabis sativa HOM05D000051 ORTHO05D010453 9.4e-31 137.9 217 46.5
CANSAT56G4105 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-30 137.5 220 45.5
CANSAT54G1500 Cannabis sativa HOM05D000051 ORTHO05D010453 6.1e-30 135.2 193 46.6
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 6.1e-30 135.2 215 46.0
CANSAT54G0861 Cannabis sativa HOM05D000051 ORTHO05D010453 8.0e-30 134.8 225 44.9
CANSAT54G1732 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-29 132.9 240 41.7
CANSAT80G2796 Cannabis sativa HOM05D000051 ORTHO05D010453 6.7e-29 131.7 225 44.0
CANSAT80G0605 Cannabis sativa HOM05D000051 ORTHO05D010453 8.8e-29 131.3 221 45.7
CANSAT54G0089 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-28 131.0 229 43.2
CANSAT80G0269 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-28 130.6 224 43.8
CANSAT54G2031 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-27 127.5 231 42.4
CANSAT56G0180 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-27 127.5 210 41.9
CANSAT54G0219 Cannabis sativa HOM05D000051 ORTHO05D010453 2.8e-27 126.3 214 42.5
CANSAT54G1299 Cannabis sativa HOM05D000051 ORTHO05D010453 1.8e-26 123.6 221 41.6
CANSAT54G2109 Cannabis sativa HOM05D000051 ORTHO05D010453 9.1e-26 121.3 225 41.8
CANSAT54G2277 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-24 117.5 238 39.9
CANSAT78G1945 Cannabis sativa HOM05D000051 ORTHO05D010453 5.0e-24 115.5 232 42.2
CANSAT56G1219 Cannabis sativa HOM05D000051 ORTHO05D010453 9.4e-23 111.3 178 41.0
CANSAT56G0651 Cannabis sativa HOM05D000051 ORTHO05D010453 2.7e-22 109.8 218 42.7
CANSAT54G2289 Cannabis sativa HOM05D000051 ORTHO05D010453 3.6e-22 109.4 144 50.0
CANSAT54G1497 Cannabis sativa HOM05D000051 ORTHO05D010453 5.2e-21 105.5 158 45.6
CANSAT54G2020 Cannabis sativa HOM05D000051 ORTHO05D010453 3.7e-19 99.4 161 43.5
CANSAT54G2217 Cannabis sativa HOM05D000051 ORTHO05D010453 3.1e-18 96.3 233 35.6
CANSAT56G0132 Cannabis sativa HOM05D000051 ORTHO05D010453 1.3e-16 90.9 190 41.6
FAN28G2526 Fragaria x ananassa HOM05D006186 ORTHO05D009138 7.2e-15 85.1 205 33.7
RcHm_v2.0_Chr2g0096151 Rosa chinensis HOM05D006186 ORTHO05D009138 2.0e-12 77.0 215 31.2
CANSAT54G0961 Cannabis sativa HOM05D000051 ORTHO05D010453 7.5e-12 75.1 137 43.1
FAN23G0589 Fragaria x ananassa HOM05D006186 ORTHO05D009138 9.8e-12 74.7 216 31.9
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.3e-11 74.3 210 29.0
Prupe.3G231800 Prunus persica HOM05D006186 ORTHO05D009138 2.2e-11 73.6 210 32.4
FvH4_6g44771 Fragaria vesca HOM05D006186 ORTHO05D009138 6.3e-11 72.0 212 32.1
FvH4_1g09331 Fragaria vesca HOM05D006186 ORTHO05D009138 1.1e-10 71.2 219 32.4
FAN14G3517 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.8e-10 70.5 212 32.1
FAN19G0522 Fragaria x ananassa HOM05D006186 ORTHO05D009138 2.4e-10 70.1 214 31.8
QL08p037410 Quercus lobata HOM05D001477 ORTHO05D001182 3.1e-10 69.7 160 33.1
CANSAT64G2494 Cannabis sativa HOM05D000051 ORTHO05D001182 7.0e-10 68.6 228 29.4
Dinv18997 Davidia involucrata HOM05D001396 ORTHO05D000493 7.0e-10 68.6 213 32.4
Dinv18996 Davidia involucrata HOM05D001396 ORTHO05D000493 9.2e-10 68.2 238 29.0
Dinv18995 Davidia involucrata HOM05D001396 ORTHO05D000493 1.2e-09 67.8 233 27.0
Prupe.8G124800 Prunus persica HOM05D006186 ORTHO05D009138 2.0e-09 67.0 177 31.6
FAN02G3420 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.5e-09 66.2 142 35.2
QL04p018567 Quercus lobata HOM05D001396 ORTHO05D000493 3.5e-09 66.2 138 31.2
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.5e-09 66.2 163 32.5
FAN09G0644 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.5e-09 65.9 123 39.8
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 5.9e-09 65.5 164 27.4
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 5.9e-09 65.5 164 27.4
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 5.9e-09 65.5 163 28.8
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 7.8e-09 65.1 182 28.6
Dinv39819 Davidia involucrata HOM05D001396 ORTHO05D000493 1.0e-08 64.7 161 31.7
QL05p072819 Quercus lobata HOM05D001396 ORTHO05D000493 1.7e-08 63.9 187 30.5
CDE05G1832 Ceratophyllum demersum HOM05D000051 ORTHO05D000493 3.8e-08 62.8 163 28.2
MD09G1093500 Malus domestica HOM05D006186 ORTHO05D009138 3.8e-08 62.8 171 31.6
MD09G1093600 Malus domestica HOM05D006186 ORTHO05D009138 5.0e-08 62.4 206 32.0
Dinv18998 Davidia involucrata HOM05D001396 ORTHO05D000493 8.6e-08 61.6 163 30.1
Dinv39826 Davidia involucrata HOM05D001396 ORTHO05D000493 8.6e-08 61.6 163 30.1
FAN19G2487 Fragaria x ananassa HOM05D006186 ORTHO05D009138 8.6e-08 61.6 216 30.1
Dinv40495 Davidia involucrata HOM05D000051 ORTHO05D000493 1.1e-07 61.2 167 29.9
FAN09G3273 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.1e-07 61.2 226 26.5
RcHm_v2.0_Chr6g0257771 Rosa chinensis HOM05D006186 ORTHO05D009138 1.1e-07 61.2 251 27.1
Dinv39825 Davidia involucrata HOM05D001396 ORTHO05D000493 2.5e-07 60.1 163 29.4
Dinv18999 Davidia involucrata HOM05D001396 ORTHO05D000493 3.3e-07 59.7 237 26.6
Dinv39824 Davidia involucrata HOM05D001396 ORTHO05D000493 3.3e-07 59.7 237 26.6
Prupe.8G124700 Prunus persica HOM05D006186 ORTHO05D009138 3.3e-07 59.7 207 30.4
GSVIVG01003198001 Vitis vinifera HOM05D001396 ORTHO05D000493 3.3e-07 59.7 189 28.6
CDE02G0635 Ceratophyllum demersum HOM05D000312 ORTHO05D000493 4.3e-07 59.3 163 27.0
FAN14G1648 Fragaria x ananassa HOM05D006186 ORTHO05D009138 4.3e-07 59.3 217 29.0
Thecc.06G198800 Theobroma cacao HOM05D001396 ORTHO05D000493 5.6e-07 58.9 221 27.1
Thhalv10027265m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 7.3e-07 58.5 146 36.3
FAN14G2977 Fragaria x ananassa HOM05D006186 ORTHO05D012372 7.3e-07 58.5 101 40.6
Hma1.2p1_0144F.1_g064660 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 7.3e-07 58.5 163 28.8
MD10G1278600 Malus domestica HOM05D006186 ORTHO05D009138 1.2e-06 57.8 221 29.4
PGSC0003DMG400016513 Solanum tuberosum HOM05D001396 ORTHO05D000493 1.2e-06 57.8 129 32.6
FAN02G2153 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.6e-06 57.4 141 33.3
FAN12G3351 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.6e-06 57.4 195 30.8
FvH4_4g33310 Fragaria vesca HOM05D006186 ORTHO05D009138 2.1e-06 57.0 195 31.3
THA.LOC104809676 Tarenaya hassleriana HOM05D001396 ORTHO05D000493 2.1e-06 57.0 160 35.6
Aqoxy1G01747 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 2.8e-06 56.6 180 27.8
COL.COLO4_31541 Corchorus olitorius HOM05D001396 ORTHO05D000493 2.8e-06 56.6 181 27.6
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 2.8e-06 56.6 162 30.2
Migut.E00535 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.6e-06 56.2 149 28.2
FAN17G1298 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.6e-06 56.2 236 27.1
Hma1.2p1_1524F.1_g288820 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 3.6e-06 56.2 187 30.5
Nitab4.5_0002580g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.7e-06 55.8 139 26.6
QL04p018513 Quercus lobata HOM05D001396 ORTHO05D000493 6.1e-06 55.5 162 29.0
Rhsim13G0172700 Rhododendron simsii HOM05D001396 ORTHO05D000493 6.1e-06 55.5 175 28.0
SGA_v2.0_scaffold37G14882 Striga asiatica HOM05D005930 ORTHO05D003423 6.1e-06 55.5 160 30.6
ATR0820G098 Amborella trichopoda HOM05D000312 ORTHO05D000221 8.0e-06 55.1 210 27.1
Nn1g03911 Nelumbo nucifera HOM05D000576 ORTHO05D003312 8.0e-06 55.1 180 25.0
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 8.0e-06 55.1 208 26.0
PGSC0003DMG400037653 Solanum tuberosum HOM05D001396 ORTHO05D000493 8.0e-06 55.1 152 28.9


User provided reference genes

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