Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2528 Cannabis sativa HOM05D000002 ORTHO05D001134 6.9e-69 263.8 133 100.0
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 4.2e-34 148.3 134 60.4
CANSAT54G1705 Cannabis sativa HOM05D000009 ORTHO05D001134 2.7e-25 119.0 64 90.6
CANSAT64G0791 Cannabis sativa HOM05D000002 ORTHO05D001134 2.7e-25 119.0 64 90.6
CANSAT01G2557 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-25 118.6 68 83.8
CANSAT25G2230 Cannabis sativa HOM05D000539 ORTHO05D000592 2.3e-24 115.9 64 87.5
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 2.8e-22 109.0 64 84.4
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 1.7e-19 99.8 222 32.9
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 1.5e-18 96.7 200 36.5
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.5e-18 94.7 219 33.3
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.5e-18 94.7 236 31.8
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 1.2e-17 93.6 221 33.9
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-17 93.2 217 33.2
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.1e-17 92.8 217 33.2
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 3.6e-17 92.0 221 32.6
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 8.0e-17 90.9 217 32.7
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.3e-16 89.4 216 32.9
Sabra16G0095800 Salix brachista HOM05D000002 ORTHO05D001134 6.8e-16 87.8 186 35.5
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 2.0e-15 86.3 186 34.4
Atru.chr13.1760 Acer truncatum HOM05D000002 ORTHO05D001134 2.2e-14 82.8 102 45.1
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 2.2e-14 82.8 207 32.4
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 6.3e-14 81.3 116 44.0
CANSAT35G0560 Cannabis sativa HOM05D000002 ORTHO05D001134 6.3e-14 81.3 77 49.4
CANSAT56G1418 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-13 79.3 78 48.7
CANSAT56G3404 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-13 79.3 77 49.4
CANSAT64G0883 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-13 79.3 78 48.7
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 2.4e-13 79.3 207 31.4
CANSAT01G1051 Cannabis sativa HOM05D000002 ORTHO05D001134 4.1e-13 78.6 78 48.7
CANSAT01G2684 Cannabis sativa HOM05D000002 ORTHO05D001134 4.1e-13 78.6 80 47.5
CANSAT21G1843 Cannabis sativa HOM05D000002 ORTHO05D001134 7.0e-13 77.8 77 46.8
Cpa.g.sc123.1 Carica papaya HOM05D000002 ORTHO05D001134 7.0e-13 77.8 107 39.3
CANSAT11G0903 Cannabis sativa HOM05D000002 ORTHO05D001134 9.2e-13 77.4 42 85.7
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 1.2e-12 77.0 122 41.8
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.2e-12 77.0 119 41.2
CANSAT80G1091 Cannabis sativa HOM05D000002 ORTHO05D001134 1.2e-12 77.0 94 44.7
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 2.7e-12 75.9 207 31.4
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 5.9e-12 74.7 207 30.9
Sp7g07980 Schrenkiella parvula HOM05D000002 ORTHO05D001134 5.9e-12 74.7 140 34.3
Atru.chr4.721 Acer truncatum HOM05D000002 ORTHO05D001134 2.3e-11 72.8 78 48.7
Ah.10g027000 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.9e-11 72.4 157 35.0
TWI79G0579 Tripterygium wilfordii HOM05D000002 ORTHO05D001134 3.9e-11 72.0 162 33.3
CANSAT56G3668 Cannabis sativa HOM05D000002 ORTHO05D001134 5.0e-11 71.6 89 48.3
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 6.6e-11 71.2 156 34.6
CANSAT35G0076 Cannabis sativa HOM05D000002 ORTHO05D001134 1.9e-10 69.7 117 35.9
TPR.G34101 Trifolium pratense HOM05D000002 ORTHO05D001134 3.3e-10 68.9 115 34.8
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 4.3e-10 68.6 216 29.2
EL10Ac7g17233 Beta vulgaris HOM05D000002 ORTHO05D001134 5.6e-10 68.2 82 40.2
AUR62019719 Chenopodium quinoa HOM05D000002 ORTHO05D001134 1.2e-09 67.0 58 58.6
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 1.6e-09 66.6 111 37.8
TPR.G29589 Trifolium pratense HOM05D000002 ORTHO05D001134 1.6e-09 66.6 42 73.8
BcaB05g23570 Brassica carinata HOM05D000002 ORTHO05D001134 2.1e-09 66.2 181 31.5
CANSAT01G0351 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT11G1596 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT35G0681 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT35G1620 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT54G2195 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT54G2526 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 65 52.3
CANSAT64G1210 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT64G1389 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CANSAT78G1580 Cannabis sativa HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
AL5G19750 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 1.4e-08 63.5 160 27.5
AUR62029287 Chenopodium quinoa HOM05D000893 ORTHO05D001134 1.8e-08 63.2 116 39.7
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 2.3e-08 62.8 42 69.0
CSS0004936 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 81 44.4
CANSAT25G1544 Cannabis sativa HOM05D000002 ORTHO05D001134 2.0e-07 59.7 108 36.1
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 2.0e-07 59.7 105 34.3
Sabra16G0058200 Salix brachista HOM05D000010 ORTHO05D037412 4.4e-07 58.5 49 57.1
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 7.5e-07 57.8 98 37.8
Ah.10g026270 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.3e-06 57.0 33 81.8
CAN.G1580.3 Capsicum annuum HOM05D000002 ORTHO05D001134 1.3e-06 57.0 58 44.8
Cpa.g.sc11.83 Carica papaya HOM05D000002 ORTHO05D001134 1.7e-06 56.6 42 69.0
CSS0026966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 56.2 75 40.0
Cpa.g.sc20.178 Carica papaya HOM05D000002 ORTHO05D001134 2.2e-06 56.2 63 41.3
Ah.05g174010 Amaranthus hybridus HOM05D000002 ORTHO05D001134 3.7e-06 55.5 33 78.8
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 3.7e-06 55.5 42 61.9
CSS0049155 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.4e-06 54.7 42 66.7
Sp7g08060 Schrenkiella parvula HOM05D000002 ORTHO05D001134 6.4e-06 54.7 66 42.4
Ah.02g118660 Amaranthus hybridus HOM05D000002 ORTHO05D001134 8.3e-06 54.3 33 78.8
Ah.05g173920 Amaranthus hybridus HOM05D000002 ORTHO05D001134 8.3e-06 54.3 33 75.8
MD15G1059300 Malus domestica HOM05D000002 ORTHO05D001134 8.3e-06 54.3 123 31.7


User provided reference genes

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