Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 0.0e+00 1338.9 673 100.0
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 0.0e+00 1281.2 702 93.2
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 3.8e-224 781.9 705 58.6
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 5.2e-221 771.5 705 57.9
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 3.3e-220 768.8 704 57.4
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 2.4e-218 762.7 718 57.1
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 2.0e-217 759.6 746 54.6
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 3.8e-216 755.4 707 57.1
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 6.5e-216 754.6 710 57.3
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 8.5e-216 754.2 710 57.3
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 1.1e-215 753.8 708 57.3
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 1.2e-214 750.4 712 55.5
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.0e-213 747.3 716 55.6
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 6.8e-213 744.6 744 53.9
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 3.7e-211 738.8 722 55.3
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 1.5e-207 726.9 705 54.5
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 9.4e-207 724.2 713 54.4
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.8e-203 712.6 719 53.0
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 3.1e-202 709.1 713 52.9
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 3.1e-202 709.1 713 53.3
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 1.7e-200 703.4 720 52.2
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 8.6e-200 701.0 721 53.4
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 1.9e-199 699.9 656 57.6
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 3.3e-199 699.1 713 52.6
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 5.7e-196 688.3 718 52.1
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 2.8e-195 686.0 718 52.6
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.1e-194 684.1 722 51.4
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 1.8e-194 683.3 719 52.0
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.1e-191 674.1 719 51.6
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 1.9e-191 673.3 717 51.3
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 8.0e-190 667.9 705 50.5
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 1.0e-189 667.5 719 51.5
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 1.0e-189 667.5 648 53.7
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 5.2e-189 665.2 719 50.3
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 1.2e-188 664.1 717 50.6
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 9.8e-188 661.0 686 52.5
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.7e-187 660.2 709 49.8
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 3.2e-186 656.0 717 50.1
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 2.7e-185 652.9 721 50.8
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 5.0e-184 648.7 708 51.4
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 5.6e-183 645.2 709 50.1
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 5.6e-183 645.2 709 50.1
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 1.6e-182 643.7 709 50.2
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 3.6e-182 642.5 704 50.4
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 8.9e-181 637.9 724 48.3
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 1.5e-180 637.1 719 48.8
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 2.0e-180 636.7 720 49.9
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 2.9e-179 632.9 708 49.4
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 3.7e-179 632.5 721 48.7
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.1e-178 630.9 530 61.1
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.9e-178 630.2 707 49.4
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 4.1e-178 629.0 709 50.8
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 1.2e-177 627.5 716 47.8
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 2.5e-175 619.8 716 47.8
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 1.4e-173 614.0 719 47.4
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 3.4e-172 609.4 719 48.1
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 5.8e-172 608.6 718 47.6
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 8.4e-171 604.7 719 46.9
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 2.4e-170 603.2 675 48.6
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 7.1e-170 601.7 682 49.1
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.2e-169 600.9 529 58.4
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 3.5e-169 599.4 536 57.5
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 1.0e-168 597.8 732 46.3
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 1.1e-167 594.3 652 50.9
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 1.5e-167 594.0 716 46.8
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 1.9e-167 593.6 677 47.7
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.9e-167 593.6 653 50.2
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 9.6e-167 591.3 673 49.2
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 3.6e-166 589.3 716 46.8
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 4.7e-166 589.0 645 48.7
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 1.1e-165 587.8 729 45.3
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 6.8e-165 585.1 715 44.9
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 2.0e-164 583.6 772 43.9
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 2.6e-164 583.2 645 48.8
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 3.8e-163 579.3 780 44.5
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 3.8e-163 579.3 722 46.0
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 4.6e-161 572.4 725 45.8
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.7e-160 570.5 771 42.9
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 3.0e-160 569.7 531 56.5
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.2e-156 557.8 719 44.6
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 6.4e-155 552.0 729 45.1
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 4.2e-154 549.3 684 46.9
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 5.6e-151 538.9 643 47.0
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 6.2e-150 535.4 526 52.7
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 1.1e-149 534.6 535 52.0
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 4.0e-149 532.7 553 53.3
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 9.0e-149 531.6 526 52.5
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.2e-148 531.2 534 52.2
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 1.4e-146 524.2 529 52.4
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 3.3e-143 513.1 688 44.6
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 5.6e-143 512.3 687 44.8
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 1.2e-140 504.6 592 47.5
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 4.2e-138 496.1 505 54.1
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 1.9e-135 487.3 539 51.4
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 7.2e-130 468.8 663 43.0
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.5e-127 461.1 689 41.1
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 4.3e-127 459.5 741 37.8
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.9e-122 444.1 694 38.9
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 1.1e-119 434.9 365 61.4
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 2.1e-113 414.1 455 53.0
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 3.9e-112 409.8 691 39.1
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 1.5e-111 407.9 502 48.0
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 1.5e-106 391.3 437 51.3
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 2.3e-104 384.0 590 38.3
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 3.4e-95 353.6 673 35.5
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.7e-83 314.7 786 31.4
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 1.3e-78 298.5 735 31.2
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.0e-76 291.2 726 30.2
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 2.0e-76 291.2 218 70.2
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 5.0e-67 260.0 651 31.0
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.3e-62 245.4 193 64.8
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 6.0e-60 236.5 537 31.5
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.5e-55 221.9 256 51.6
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 3.4e-47 194.1 222 51.4
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 5.8e-47 193.4 148 66.2
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 1.2e-44 185.7 204 44.1
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-40 169.9 255 38.0
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 9.9e-39 166.0 280 39.6
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 1.5e-34 152.1 210 42.9
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 1.9e-34 151.8 142 59.2
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 9.6e-26 122.9 146 43.8
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 4.0e-24 117.5 212 37.7
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 4.0e-24 117.5 212 37.7
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 9.0e-24 116.3 321 30.8
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 1.0e-22 112.8 266 32.7
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 1.3e-22 112.5 82 56.1
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.8e-22 110.9 95 54.7
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 3.1e-16 91.3 104 40.4
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 1.7e-14 85.5 92 48.9
BcaB05g24338 Brassica carinata HOM05D005891 ORTHO05D007214 1.5e-10 72.4 74 55.4
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 1.5e-10 72.4 93 44.1
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 5.7e-10 70.5 66 45.5


User provided reference genes

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