Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 5.2e-41 170.6 87 100.0
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 2.2e-23 112.1 78 73.1
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 6.4e-23 110.5 74 73.0
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 6.4e-23 110.5 78 71.8
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 1.9e-22 109.0 82 68.3
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 4.1e-22 107.8 70 75.7
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 7.1e-22 107.1 82 67.1
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.1e-22 107.1 74 71.6
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.1e-22 107.1 74 71.6
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 1.6e-21 105.9 81 64.2
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 2.1e-21 105.5 82 67.1
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 2.1e-21 105.5 74 70.3
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 2.1e-21 105.5 83 68.7
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 2.7e-21 105.1 74 70.3
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 2.7e-21 105.1 82 65.9
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 3.5e-21 104.8 78 65.4
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 4.6e-21 104.4 82 65.9
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 4.6e-21 104.4 78 64.1
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 4.6e-21 104.4 82 63.4
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 4.6e-21 104.4 74 68.9
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 4.6e-21 104.4 78 65.4
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 6.0e-21 104.0 78 65.4
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 6.0e-21 104.0 82 65.9
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 6.0e-21 104.0 78 66.7
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 6.0e-21 104.0 72 69.4
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 6.0e-21 104.0 73 69.9
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 7.8e-21 103.6 79 64.6
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 7.8e-21 103.6 78 66.7
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 7.8e-21 103.6 78 65.4
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 7.8e-21 103.6 69 73.9
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 7.8e-21 103.6 78 69.2
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 1.0e-20 103.2 67 73.1
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 1.0e-20 103.2 82 65.9
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 1.3e-20 102.8 86 61.6
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 1.3e-20 102.8 86 61.6
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 1.3e-20 102.8 74 67.6
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 1.3e-20 102.8 70 70.0
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 1.3e-20 102.8 81 63.0
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 1.7e-20 102.4 77 66.2
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 1.7e-20 102.4 81 63.0
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 2.3e-20 102.1 80 62.5
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 2.3e-20 102.1 60 80.0
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 2.3e-20 102.1 80 62.5
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 3.0e-20 101.7 78 64.1
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 3.9e-20 101.3 69 69.6
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 3.9e-20 101.3 69 69.6
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 3.9e-20 101.3 77 64.9
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 3.9e-20 101.3 82 67.1
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 5.1e-20 100.9 76 64.5
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 5.1e-20 100.9 70 70.0
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 5.1e-20 100.9 69 71.0
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 5.1e-20 100.9 67 71.6
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 5.1e-20 100.9 82 63.4
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 6.6e-20 100.5 69 69.6
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 6.6e-20 100.5 69 69.6
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 6.6e-20 100.5 78 64.1
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 6.6e-20 100.5 82 63.4
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 6.6e-20 100.5 68 69.1
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 8.6e-20 100.1 76 63.2
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 8.6e-20 100.1 78 65.4
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 8.6e-20 100.1 82 62.2
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 8.6e-20 100.1 73 67.1
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 1.1e-19 99.8 69 68.1
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 1.1e-19 99.8 69 69.6
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.5e-19 99.4 62 75.8
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 1.5e-19 99.4 80 62.5
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 1.5e-19 99.4 73 65.8
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 1.5e-19 99.4 80 62.5
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.5e-19 99.4 70 68.6
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 1.5e-19 99.4 78 65.4
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.5e-19 99.4 77 63.6
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 1.9e-19 99.0 78 64.1
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 1.9e-19 99.0 70 67.1
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 1.9e-19 99.0 78 65.4
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 1.9e-19 99.0 63 73.0
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 1.9e-19 99.0 67 71.6
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 1.9e-19 99.0 71 66.2
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 2.5e-19 98.6 70 68.6
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.5e-19 98.6 86 59.3
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.5e-19 98.6 86 59.3
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 2.5e-19 98.6 70 70.0
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 2.5e-19 98.6 74 63.5
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 2.5e-19 98.6 76 64.5
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 3.3e-19 98.2 78 62.8
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 3.3e-19 98.2 82 61.0
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 3.3e-19 98.2 67 68.7
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 3.3e-19 98.2 74 66.2
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 4.3e-19 97.8 66 71.2
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 4.3e-19 97.8 88 61.4
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 5.6e-19 97.4 75 62.7
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 7.3e-19 97.1 68 67.6
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 7.3e-19 97.1 67 67.2
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 7.3e-19 97.1 73 69.9
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 7.3e-19 97.1 74 62.2
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 7.3e-19 97.1 84 64.3
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 7.3e-19 97.1 74 63.5
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 7.3e-19 97.1 73 63.0
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 9.5e-19 96.7 78 61.5
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 9.5e-19 96.7 78 62.8
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 9.5e-19 96.7 78 62.8
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 9.5e-19 96.7 75 62.7
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 1.2e-18 96.3 74 64.9
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 1.2e-18 96.3 68 66.2
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 1.2e-18 96.3 63 71.4
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.2e-18 96.3 78 61.5
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.2e-18 96.3 84 58.3
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.2e-18 96.3 63 71.4
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 2.8e-18 95.1 69 63.8
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.6e-18 94.7 63 69.8
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 4.7e-18 94.4 77 63.6
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 8.1e-18 93.6 82 54.9
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.1e-17 93.2 70 67.1
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 1.1e-17 93.2 59 67.8
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 1.1e-17 93.2 68 66.2
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 1.4e-17 92.8 63 68.3
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 1.4e-17 92.8 63 68.3
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 1.4e-17 92.8 67 65.7
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 2.4e-17 92.0 67 67.2
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 2.4e-17 92.0 69 60.9
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 2.4e-17 92.0 61 70.5
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 2.4e-17 92.0 64 68.8
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 3.1e-17 91.7 58 72.4
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 3.1e-17 91.7 71 54.9
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.0e-17 91.3 69 63.8
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.0e-17 91.3 69 63.8
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 4.0e-17 91.3 67 61.2
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 5.2e-17 90.9 82 61.0
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 5.2e-17 90.9 85 57.6
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.5e-16 89.4 64 67.2
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.5e-16 89.4 64 67.2
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 2.6e-16 88.6 87 56.3
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 3.4e-16 88.2 70 62.9
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.7e-15 85.9 59 64.4
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.2e-15 85.5 61 62.3
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 3.8e-15 84.7 66 59.1
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 4.9e-15 84.3 68 63.2
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 4.9e-15 84.3 63 65.1
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.9e-14 82.4 66 60.6
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 5.4e-14 80.9 67 58.2
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 5.4e-14 80.9 67 58.2
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 7.1e-14 80.5 66 59.1
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 1.2e-13 79.7 95 47.4
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 3.5e-13 78.2 63 58.7
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 4.6e-13 77.8 64 56.2
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 7.8e-13 77.0 64 54.7
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 1.0e-12 76.6 63 60.3
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 1.0e-12 76.6 60 60.0
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 3.0e-12 75.1 55 58.2
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 3.0e-12 75.1 55 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 1.9e-11 72.4 61 54.1
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 4.8e-10 67.8 111 38.7
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 1.1e-09 66.6 54 51.9
Gorai.013G138000 Gossypium raimondii HOM05D004571 ORTHO05D005334 2.2e-07 58.9 46 60.9
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 4.9e-07 57.8 74 39.2


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