Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 7.7e-297 1023.1 524 100.0
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 2.0e-119 433.7 510 52.0
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 3.6e-113 412.9 502 51.0
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 2.1e-108 397.1 509 49.5
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.6e-108 396.0 523 48.4
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.6e-108 396.0 503 49.1
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.0e-107 394.8 507 50.1
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.3e-107 394.4 504 49.6
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-106 391.0 500 49.0
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.6e-106 389.0 504 49.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.1e-104 384.8 554 45.8
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.4e-101 374.4 500 50.6
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 7.6e-95 352.1 505 47.3
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.2e-94 350.5 499 46.9
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.9e-94 350.1 479 48.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 3.5e-92 343.2 495 47.9
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 2.4e-88 330.5 507 44.8
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 2.0e-87 327.4 500 44.8
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 4.5e-87 326.2 521 45.3
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.1e-85 321.6 515 44.3
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 9.3e-85 318.5 495 44.4
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 7.9e-84 315.5 527 41.6
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 5.6e-82 309.3 501 44.1
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 3.1e-80 303.5 503 44.5
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 1.2e-76 291.6 500 42.6
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.7e-73 280.0 511 41.7
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 8.5e-70 268.9 510 40.4
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 4.2e-69 266.5 509 41.1
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 2.7e-68 263.8 494 39.5
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 7.9e-68 262.3 417 42.4
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.5e-66 257.3 515 39.0
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 7.4e-66 255.8 541 39.7
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.3e-65 255.0 508 40.4
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 4.1e-64 250.0 494 40.7
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.7e-62 244.6 385 46.0
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 1.4e-61 241.5 498 37.1
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 5.5e-61 239.6 396 42.4
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 6.7e-59 232.6 517 36.9
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 2.0e-58 231.1 387 41.9
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 3.3e-58 230.3 404 41.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 7.4e-58 229.2 495 38.0
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 3.7e-57 226.9 387 41.3
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.1e-56 225.3 385 41.3
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 2.4e-56 224.2 502 36.3
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 4.1e-56 223.4 401 41.4
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.2e-54 217.6 499 36.5
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.1e-53 215.3 485 37.3
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 4.2e-53 213.4 487 38.6
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 7.2e-53 212.6 509 37.5
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.2e-53 212.6 482 38.8
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 7.2e-53 212.6 542 33.6
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.7e-52 210.7 503 36.2
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 4.7e-52 209.9 486 38.5
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 4.7e-52 209.9 480 37.3
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.0e-51 208.8 482 37.8
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.3e-51 207.6 486 37.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 2.3e-51 207.6 487 38.4
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 2.0e-50 204.5 493 37.3
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 5.7e-50 203.0 519 35.1
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 9.7e-50 202.2 524 34.9
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 4.1e-48 196.8 369 39.8
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.3e-46 191.8 512 34.4
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.2e-46 191.0 522 34.9
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 2.9e-46 190.7 469 35.2
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.9e-45 188.0 533 34.0
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 5.5e-45 186.4 281 45.9
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.4e-43 181.8 487 33.1
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 5.2e-43 179.9 506 33.6
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 3.3e-42 177.2 430 35.3
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 2.2e-41 174.5 490 33.9
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.4e-40 171.8 494 34.8
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 6.5e-38 162.9 498 34.5
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 3.2e-37 160.6 399 35.8
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 2.7e-36 157.5 387 38.0
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 2.7e-36 157.5 387 38.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.0e-35 155.6 427 33.7
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 4.0e-35 153.7 519 32.8
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 3.4e-34 150.6 381 36.0
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.7e-33 148.3 316 34.5
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.8e-33 147.5 209 46.4
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.6e-31 141.7 364 34.6
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 2.7e-31 141.0 502 30.7
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.7e-31 141.0 392 32.9
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 4.5e-31 140.2 490 31.8
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 2.3e-30 137.9 333 38.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 5.0e-30 136.7 381 30.7
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.2e-29 133.7 380 33.2
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 3.6e-28 130.6 360 34.4
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 6.1e-28 129.8 435 32.4
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 8.0e-28 129.4 490 30.4
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 2.3e-27 127.9 488 30.1
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 4.0e-27 127.1 382 34.0
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 5.2e-27 126.7 419 31.0
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.8e-27 126.3 495 29.1
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 1.6e-23 115.2 342 29.8
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.0e-23 114.8 351 31.6
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 6.6e-22 109.8 359 31.2
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.3e-21 107.1 253 37.9
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 9.5e-21 105.9 214 36.4
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.0e-19 102.4 192 42.2
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 2.3e-19 101.3 436 28.7
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 4.0e-19 100.5 179 43.6
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 4.4e-18 97.1 85 56.5
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 4.4e-18 97.1 146 41.1
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.1e-16 92.4 132 47.7
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.0e-15 88.2 322 28.9
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 2.0e-15 88.2 167 39.5
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 2.0e-15 88.2 85 57.6
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 4.6e-15 87.0 146 39.0
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 3.9e-14 84.0 326 29.4
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 3.9e-14 84.0 71 64.8
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 1.5e-13 82.0 336 28.6
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 3.3e-13 80.9 310 32.9
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 7.3e-13 79.7 170 40.6
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 2.1e-12 78.2 175 37.1
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.8e-12 77.8 175 37.1
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 1.1e-11 75.9 161 37.9
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.8e-11 75.1 154 39.0
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 5.2e-11 73.6 210 35.2
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 1.2e-10 72.4 160 40.6
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 7.5e-10 69.7 349 28.4
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 7.5e-10 69.7 89 48.3
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 4.1e-08 63.9 176 37.5
Atru.chr8.1591 Acer truncatum HOM05D005512 ORTHO05D006716 2.1e-07 61.6 50 66.0
Sc07g0005480 Simmondsia chinensis HOM05D005512 ORTHO05D006716 2.7e-07 61.2 76 50.0
Ah.08g210690 Amaranthus hybridus HOM05D005512 ORTHO05D006716 6.0e-07 60.1 217 28.6
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 6.0e-07 60.1 192 31.8
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 1.3e-06 58.9 127 37.0


User provided reference genes

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