Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 7.4e-190 667.5 472 100.0
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 3.5e-75 286.6 456 46.3
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.3e-74 284.6 460 45.0
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.9e-73 280.8 459 44.9
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.5e-73 280.4 466 44.4
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 4.3e-73 279.6 458 45.4
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.7e-72 276.6 458 45.0
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 8.1e-72 275.4 458 41.9
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 8.1e-72 275.4 458 47.4
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.7e-69 267.7 465 43.9
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 3.8e-69 266.5 458 45.9
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 1.4e-68 264.6 459 44.9
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.5e-68 263.8 464 47.2
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 7.1e-68 262.3 457 42.0
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.2e-67 261.5 462 44.4
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.8e-66 257.7 469 42.9
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 6.7e-66 255.8 457 44.0
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 6.7e-66 255.8 466 41.6
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 5.6e-65 252.7 461 42.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.3e-64 251.5 462 43.7
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.6e-64 251.1 460 41.7
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 2.1e-64 250.8 463 43.4
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.1e-60 238.4 461 46.0
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.5e-60 237.3 456 40.1
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 4.2e-60 236.5 457 41.4
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 9.3e-60 235.3 466 41.0
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.2e-59 235.0 461 39.5
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.6e-59 234.6 465 40.9
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.8e-58 231.1 461 40.3
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 3.0e-58 230.3 459 40.5
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 3.9e-58 229.9 456 46.1
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.9e-58 229.9 473 39.1
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 6.7e-58 229.2 457 42.9
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.1e-57 228.4 457 43.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.5e-57 227.3 483 39.8
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 4.3e-57 226.5 459 41.4
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 9.7e-57 225.3 459 44.2
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 1.6e-56 224.6 461 40.6
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 8.2e-56 222.2 475 41.3
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 3.1e-55 220.3 472 38.3
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 5.3e-55 219.5 468 40.0
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 5.3e-55 219.5 457 38.3
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 1.2e-54 218.4 468 39.5
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 7.7e-54 215.7 456 38.2
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 1.7e-53 214.5 459 39.7
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 4.6e-51 206.5 459 41.2
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 6.1e-51 206.1 453 38.4
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 6.1e-51 206.1 457 36.8
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.4e-50 204.9 455 42.0
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.0e-49 201.1 454 41.4
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 2.5e-49 200.7 466 37.6
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 7.4e-49 199.1 464 37.1
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 3.7e-48 196.8 457 37.2
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 5.3e-47 193.0 457 38.9
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 9.1e-47 192.2 456 35.5
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 4.5e-46 189.9 447 36.0
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.3e-45 188.3 459 34.4
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.1e-44 185.3 461 48.6
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 1.9e-44 184.5 457 38.3
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 4.7e-43 179.9 462 36.4
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 6.1e-43 179.5 476 45.4
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.5e-41 174.9 458 39.3
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 4.4e-41 173.3 465 34.0
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 5.7e-41 172.9 395 35.2
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.2e-40 171.0 392 37.0
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.8e-40 170.6 472 37.7
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 8.2e-40 169.1 458 40.8
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.4e-39 168.3 479 33.6
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 1.4e-39 168.3 394 36.3
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.5e-38 164.9 460 34.1
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 1.5e-38 164.9 471 34.8
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 5.9e-38 162.9 467 35.1
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 5.9e-38 162.9 465 36.1
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 7.7e-38 162.5 464 32.8
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 1.0e-37 162.2 467 34.3
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 1.3e-37 161.8 466 34.3
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 1.7e-37 161.4 464 33.4
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 1.7e-37 161.4 463 33.7
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 2.2e-37 161.0 466 35.0
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 2.9e-37 160.6 466 35.0
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 3.8e-37 160.2 470 34.0
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 5.0e-37 159.8 389 37.0
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 9.4e-36 155.6 463 41.9
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 3.3e-33 147.1 470 33.0
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 7.4e-33 146.0 478 31.6
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 6.3e-32 142.9 207 45.9
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 1.3e-29 135.2 383 32.9
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 3.8e-29 133.7 459 32.0
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.6e-27 128.3 391 32.2
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.1e-27 127.9 337 51.6
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 1.4e-26 125.2 204 47.5
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.4e-26 125.2 390 31.5
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 8.8e-26 122.5 138 57.2
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.8e-23 114.8 211 42.7
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 2.4e-23 114.4 428 30.8
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 1.0e-21 109.0 192 46.4
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 3.2e-20 104.0 465 29.7
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 1.2e-19 102.1 191 42.9
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 8.0e-19 99.4 488 32.8
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 3.4e-17 94.0 456 27.4
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 2.2e-16 91.3 456 28.9
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.3e-16 89.7 54 77.8
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.3e-16 89.7 54 77.8
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.3e-16 89.4 54 77.8
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.8e-15 88.2 54 75.9
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 5.4e-15 86.7 50 82.0
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 5.4e-15 86.7 455 30.1
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 5.4e-15 86.7 462 28.6
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.1e-15 85.9 52 78.8
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.6e-14 85.1 54 74.1
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.6e-14 85.1 54 74.1
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.6e-14 85.1 54 74.1
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.7e-14 84.3 54 74.1
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 3.5e-14 84.0 47 83.0
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.3e-13 82.0 131 44.3
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 4.7e-11 73.6 403 26.3
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 3.0e-10 70.9 49 67.3
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 1.2e-09 68.9 54 66.7
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 2.0e-09 68.2 52 61.5
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.2e-06 58.9 40 70.0


User provided reference genes

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