Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 2.0e-115 419.1 205 100.0
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 3.0e-87 325.5 210 77.6
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.3e-79 300.1 191 74.9
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.1e-79 298.1 188 73.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 6.7e-79 297.7 181 77.9
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 4.3e-78 295.0 182 75.3
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.3e-77 293.5 194 73.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.3e-77 293.5 180 75.0
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.3e-77 293.5 188 75.5
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.3e-77 293.5 201 69.7
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.1e-77 292.7 188 72.3
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.1e-76 290.4 196 68.9
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.1e-76 288.9 191 72.8
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 3.1e-76 288.9 188 72.9
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 5.3e-76 288.1 210 68.6
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 9.0e-76 287.3 198 69.7
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.5e-75 286.6 184 74.5
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.5e-75 286.6 212 66.5
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.6e-75 285.8 191 72.8
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.6e-75 285.8 191 71.7
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.5e-75 285.0 184 73.9
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.3e-74 283.5 182 72.0
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.7e-74 283.1 180 74.4
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.9e-74 282.3 184 72.3
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.9e-74 282.3 179 72.1
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 3.8e-74 282.0 177 75.7
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 4.9e-74 281.6 202 68.8
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.1e-73 280.4 183 73.2
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.9e-73 279.6 183 73.8
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.9e-73 279.6 180 71.1
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 3.2e-73 278.9 189 68.3
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 4.2e-73 278.5 195 68.2
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 4.2e-73 278.5 181 69.6
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 9.3e-73 277.3 214 65.4
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 1.6e-72 276.6 186 71.5
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.6e-72 276.6 181 69.1
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 2.1e-72 276.2 180 73.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 2.7e-72 275.8 182 73.6
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 3.5e-72 275.4 181 69.6
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 7.9e-72 274.2 188 69.1
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.3e-71 273.5 202 63.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.8e-71 273.1 182 71.4
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 5.1e-71 271.6 181 71.3
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 6.7e-71 271.2 180 70.6
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 6.7e-71 271.2 194 66.5
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.5e-70 270.0 177 70.6
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 2.5e-70 269.2 180 72.2
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.5e-70 269.2 182 70.9
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 2.5e-70 269.2 179 71.5
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 4.3e-70 268.5 206 63.6
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 7.4e-70 267.7 197 63.5
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 8.1e-69 264.2 202 62.4
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 2.4e-68 262.7 182 69.2
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 2.4e-68 262.7 216 60.2
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 4.0e-68 261.9 198 63.6
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 5.3e-68 261.5 193 64.2
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 6.9e-68 261.2 182 67.6
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 9.0e-68 260.8 205 62.9
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 9.0e-68 260.8 205 62.9
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 2.6e-67 259.2 190 66.3
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 3.4e-67 258.8 207 63.3
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 4.5e-67 258.5 179 68.7
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 4.5e-67 258.5 174 69.0
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 7.6e-67 257.7 183 63.9
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-66 256.5 183 67.2
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.7e-66 256.5 183 67.2
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 2.2e-66 256.1 202 63.4
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 2.2e-66 256.1 202 63.4
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 2.2e-66 256.1 202 63.4
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.2e-66 256.1 180 67.2
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 6.5e-66 254.6 186 66.7
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.9e-65 253.1 176 68.8
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 2.5e-65 252.7 179 66.5
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 2.5e-65 252.7 182 66.5
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 3.2e-65 252.3 179 66.5
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 7.1e-65 251.1 179 66.5
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 7.1e-65 251.1 186 63.4
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.1e-64 249.6 183 62.8
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.7e-64 249.2 179 65.9
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 4.6e-64 248.4 178 66.3
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.8e-63 246.5 182 63.7
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 3.9e-63 245.4 202 63.4
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.7e-63 244.2 176 64.8
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.8e-61 238.4 203 60.1
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.8e-60 236.5 156 72.4
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.4e-60 236.1 201 61.2
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.0e-60 234.2 156 69.2
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.2e-59 233.8 146 74.7
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 5.9e-59 231.5 158 70.9
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 1.7e-58 229.9 174 64.4
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 4.2e-57 225.3 182 61.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.1e-54 217.2 150 72.0
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 3.3e-54 215.7 181 59.7
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.8e-52 209.9 152 65.8
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 4.5e-51 205.3 187 59.9
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.4e-49 200.3 174 56.9
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 2.5e-49 199.5 136 70.6
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 9.4e-49 197.6 168 59.5
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.4e-47 193.7 114 86.8
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 3.9e-47 192.2 172 53.5
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.5e-46 190.3 175 53.1
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 5.7e-46 188.3 196 50.5
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 2.6e-43 179.5 181 48.6
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.9e-43 178.3 188 48.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 7.7e-43 177.9 133 67.7
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 8.5e-42 174.5 166 56.6
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 8.8e-39 164.5 182 47.3
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 4.4e-38 162.2 143 54.5
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 1.1e-33 147.5 98 66.3
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-32 143.7 128 57.0
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.0e-31 141.0 88 75.0
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 2.0e-30 136.7 128 57.0
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 1.3e-29 134.0 98 62.2
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 2.7e-27 126.3 86 69.8
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.0e-26 124.4 139 47.5
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 5.0e-26 122.1 130 50.0
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.8e-23 113.6 98 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.3e-21 107.5 142 42.3
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 3.7e-21 105.9 71 74.6
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.4e-20 103.2 74 66.2
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 5.4e-20 102.1 99 56.6
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 2.1e-16 90.1 125 42.4
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 6.1e-16 88.6 237 28.3
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 2.3e-15 86.7 101 50.5
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 6.8e-15 85.1 62 67.7
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 1.5e-14 84.0 101 49.5
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.1e-09 67.8 44 65.9
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 4.3e-09 65.9 58 60.3
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 8.9e-07 58.2 36 77.8


User provided reference genes

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