Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 4.8e-49 197.6 105 100.0
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 4.8e-49 197.6 105 100.0
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 4.7e-36 154.5 104 77.9
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 3.3e-34 148.3 108 75.0
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 5.7e-34 147.5 105 72.4
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 9.7e-34 146.7 104 73.1
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 9.7e-34 146.7 103 74.8
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 2.2e-33 145.6 104 75.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 3.7e-33 144.8 104 74.0
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 3.7e-33 144.8 105 72.4
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 6.3e-33 144.1 106 73.6
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 6.3e-33 144.1 104 70.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 8.2e-33 143.7 106 74.5
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 2.4e-32 142.1 104 71.2
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 3.1e-32 141.7 109 70.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 7.0e-32 140.6 107 70.1
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 7.0e-32 140.6 99 71.7
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 9.1e-32 140.2 106 72.6
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 3.5e-31 138.3 107 72.0
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 4.5e-31 137.9 105 68.6
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 4.5e-31 137.9 107 70.1
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 7.7e-31 137.1 107 70.1
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.3e-30 136.3 103 69.9
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 1.7e-30 136.0 107 69.2
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 5.0e-30 134.4 102 69.6
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 5.0e-30 134.4 102 68.6
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 8.5e-30 133.7 104 68.3
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 1.9e-29 132.5 103 67.0
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 2.5e-29 132.1 103 69.9
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 2.5e-29 132.1 101 69.3
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 3.2e-29 131.7 103 67.0
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 4.2e-29 131.3 104 69.2
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 4.2e-29 131.3 106 66.0
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 5.5e-29 131.0 88 73.9
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.6e-28 129.4 102 65.7
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.6e-28 129.4 102 64.7
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 1.6e-28 129.4 101 67.3
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 2.1e-28 129.0 103 65.0
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 2.1e-28 129.0 113 63.7
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 2.7e-28 128.6 106 63.2
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 2.7e-28 128.6 104 64.4
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 4.7e-28 127.9 107 66.4
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 8.0e-28 127.1 107 68.2
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 8.0e-28 127.1 102 64.7
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 8.0e-28 127.1 107 67.3
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 8.0e-28 127.1 110 62.7
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 8.0e-28 127.1 110 62.7
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 1.0e-27 126.7 106 62.3
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 4.0e-27 124.8 110 62.7
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 5.2e-27 124.4 103 63.1
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 5.2e-27 124.4 107 65.4
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 6.7e-27 124.0 102 62.7
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 6.7e-27 124.0 102 62.7
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 6.7e-27 124.0 103 65.0
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 6.7e-27 124.0 105 63.8
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 1.1e-26 123.2 105 66.7
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 1.1e-26 123.2 101 63.4
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 2.6e-26 122.1 102 62.7
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 4.4e-26 121.3 105 61.0
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 4.4e-26 121.3 107 61.7
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 5.7e-26 120.9 104 63.5
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 9.7e-26 120.2 81 71.6
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 9.7e-26 120.2 104 58.7
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.3e-25 119.8 109 58.7
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 2.2e-25 119.0 102 59.8
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 4.8e-25 117.9 83 69.9
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 6.3e-25 117.5 109 59.6
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 8.2e-25 117.1 107 61.7
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 3.1e-24 115.2 87 63.2
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 3.1e-24 115.2 89 65.2
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 4.1e-24 114.8 114 57.0
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 4.1e-24 114.8 103 60.2
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 5.3e-24 114.4 89 65.2
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 7.0e-24 114.0 114 55.3
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 9.1e-24 113.6 114 56.1
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 9.1e-24 113.6 114 56.1
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 1.2e-23 113.2 104 57.7
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 1.2e-23 113.2 104 56.7
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 1.6e-23 112.8 104 56.7
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 2.0e-23 112.5 107 60.7
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 4.5e-23 111.3 114 56.1
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 4.5e-23 111.3 103 57.3
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 5.9e-23 110.9 109 57.8
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 1.3e-22 109.8 114 55.3
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 55.3
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 1.7e-22 109.4 114 53.5
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 6.5e-22 107.5 87 59.8
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 8.5e-22 107.1 114 54.4
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 2.5e-21 105.5 114 52.6
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 3.2e-21 105.1 104 52.9
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 7.2e-21 104.0 88 55.7
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 1.2e-20 103.2 89 59.6
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 2.1e-20 102.4 105 55.2
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 5.7e-18 94.4 85 56.5
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 5.4e-16 87.8 90 52.2
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 1.3e-14 83.2 96 44.8
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 3.2e-13 78.6 84 44.0
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 4.0e-11 71.6 71 52.1
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 4.0e-11 71.6 71 52.1
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 6.8e-11 70.9 87 39.1
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 2.4e-08 62.4 53 54.7


User provided reference genes

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