Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2246 Cannabis sativa HOM05D005524 ORTHO05D005392 5.5e-21 103.6 61 100.0
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 4.1e-08 60.8 64 65.6
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 5.3e-08 60.5 64 65.6
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 6.9e-08 60.1 64 67.2
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 9.1e-08 59.7 64 64.1
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 64.1
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 64.1
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 64.1
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 64.1
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.5e-07 58.9 64 64.1
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 1.5e-07 58.9 64 64.1
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 1.5e-07 58.9 64 64.1
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 2.6e-07 58.2 64 62.5
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 2.6e-07 58.2 64 62.5
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 2.6e-07 58.2 64 64.1
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 2.6e-07 58.2 64 64.1
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 4.5e-07 57.4 64 62.5
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 4.5e-07 57.4 64 62.5
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 4.5e-07 57.4 64 62.5
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 4.5e-07 57.4 64 62.5
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 4.5e-07 57.4 64 62.5
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 7.7e-07 56.6 64 62.5
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 7.7e-07 56.6 64 62.5
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 7.7e-07 56.6 64 62.5
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 1.3e-06 55.8 64 64.1
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 3.8e-06 54.3 64 59.4
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 8.5e-06 53.1 64 60.9


User provided reference genes

Program Settings