Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 9.9e-130 466.8 245 100.0
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 3.1e-91 339.0 244 71.7
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 1.5e-90 336.7 244 75.4
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 2.0e-90 336.3 244 74.2
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.7e-89 333.2 250 71.2
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 1.7e-89 333.2 244 72.1
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 1.1e-88 330.5 219 79.0
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.2e-87 327.0 243 70.8
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 1.2e-87 327.0 243 71.6
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 4.6e-87 325.1 244 72.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 1.4e-86 323.6 246 69.9
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.0e-86 322.4 243 68.7
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.1e-86 321.6 249 69.5
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 4.4e-85 318.5 249 67.9
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 7.4e-85 317.8 249 70.3
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 9.7e-85 317.4 246 68.3
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.3e-84 317.0 247 68.0
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 2.2e-84 316.2 202 79.2
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.2e-84 316.2 247 68.4
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 2.2e-84 316.2 248 68.5
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 2.8e-84 315.8 246 69.5
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 6.3e-84 314.7 248 69.8
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 6.3e-84 314.7 246 70.7
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 1.4e-83 313.5 239 68.6
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.8e-83 313.2 245 66.9
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.5e-82 310.1 185 83.2
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.5e-82 310.1 242 69.0
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 7.7e-82 307.8 243 68.3
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 1.0e-81 307.4 251 67.7
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.7e-81 306.6 212 74.1
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 1.7e-81 306.6 247 67.6
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 2.9e-81 305.8 244 67.2
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 5.0e-81 305.1 169 85.8
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 5.0e-81 305.1 198 76.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 6.5e-81 304.7 244 66.8
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 8.5e-81 304.3 242 64.9
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 1.4e-80 303.5 171 84.8
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 3.2e-80 302.4 246 67.1
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 3.2e-80 302.4 223 74.9
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.2e-80 302.0 246 65.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 5.5e-80 301.6 243 68.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 7.2e-80 301.2 241 67.2
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 9.4e-80 300.8 196 75.5
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.2e-79 300.4 242 66.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.2e-79 300.4 177 81.9
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.6e-79 300.1 241 67.2
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.7e-79 299.3 198 74.7
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 3.6e-79 298.9 169 82.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 4.7e-79 298.5 246 66.3
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 4.7e-79 298.5 187 78.6
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 4.7e-79 298.5 197 74.1
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 1.0e-78 297.4 242 65.3
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 1.4e-78 297.0 244 67.2
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.8e-78 296.6 246 66.7
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 3.0e-78 295.8 198 74.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.9e-78 295.4 237 66.7
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 5.2e-78 295.0 243 67.5
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 5.2e-78 295.0 246 67.1
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 5.2e-78 295.0 246 67.1
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 8.8e-78 294.3 241 65.1
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 8.8e-78 294.3 245 66.1
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.5e-77 293.5 231 67.5
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 2.0e-77 293.1 223 69.1
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 3.3e-77 292.4 249 65.1
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 3.3e-77 292.4 247 65.2
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 4.4e-77 292.0 243 64.6
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 7.4e-77 291.2 216 68.1
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 9.7e-77 290.8 241 64.7
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.7e-76 290.0 177 77.4
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 2.2e-76 289.7 230 67.0
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 2.2e-76 289.7 230 67.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.8e-76 289.3 247 65.2
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.7e-76 288.9 247 64.8
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 3.7e-76 288.9 246 64.2
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 3.7e-76 288.9 247 66.0
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.7e-76 288.9 246 64.2
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 4.8e-76 288.5 248 63.3
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.8e-75 286.6 182 77.5
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.8e-75 286.6 224 67.9
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 4.1e-75 285.4 252 64.3
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.2e-74 283.9 248 63.7
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.2e-74 283.9 245 64.9
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.0e-74 283.1 238 63.0
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 3.8e-73 278.9 242 62.8
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 6.5e-73 278.1 247 62.3
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.2e-72 275.4 253 61.3
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 4.2e-72 275.4 253 61.3
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.8e-70 270.0 246 61.4
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 2.3e-70 269.6 183 71.6
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 2.6e-69 266.2 192 64.1
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.7e-69 265.0 253 58.5
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 8.2e-68 261.2 247 59.9
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 9.1e-67 257.7 222 64.9
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 2.0e-66 256.5 249 59.8
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 2.0e-66 256.5 249 59.8
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 3.5e-66 255.8 153 79.1
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 1.0e-65 254.2 220 62.7
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.8e-65 252.3 171 67.3
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.8e-65 252.3 171 67.3
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 8.5e-65 251.1 172 73.3
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.9e-64 250.0 207 68.6
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 1.2e-61 240.7 202 59.4
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.1e-59 234.2 142 78.9
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 3.1e-59 232.6 211 55.5
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 7.2e-56 221.5 242 52.9
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 6.1e-55 218.4 132 80.3
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 4.0e-54 215.7 201 63.7
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.0e-53 213.4 211 54.5
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 5.0e-49 198.7 128 77.3
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.6e-47 193.7 120 78.3
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.7e-42 176.4 124 71.8
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.8e-38 163.7 105 80.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 2.4e-27 126.7 220 36.8
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.6e-23 114.0 146 51.4
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 4.7e-23 112.5 194 34.0
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 2.1e-18 97.1 183 36.1
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 1.2e-10 71.2 50 66.0
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 2.4e-06 57.0 152 27.0


User provided reference genes

Program Settings