Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2087 Cannabis sativa HOM05D008880 ORTHO05D011235 1.4e-128 463.0 241 100.0
CANSAT21G0969 Cannabis sativa HOM05D008880 ORTHO05D011235 1.5e-74 283.5 240 67.9
CANSAT21G0142 Cannabis sativa HOM05D008880 ORTHO05D011235 8.1e-68 261.2 199 68.8
CANSAT11G0103 Cannabis sativa HOM05D008880 ORTHO05D011235 6.9e-59 231.5 199 63.3
CANSAT78G0818 Cannabis sativa HOM05D008880 ORTHO05D011235 1.1e-53 214.2 152 75.7
CANSAT11G0442 Cannabis sativa HOM05D008880 ORTHO05D011235 6.2e-52 208.4 135 81.5
CANSAT54G2124 Cannabis sativa HOM05D008880 ORTHO05D011235 1.6e-39 167.2 130 70.8
CANSAT64G2389 Cannabis sativa HOM05D008880 ORTHO05D011235 3.1e-35 152.9 139 60.4
CANSAT35G0612 Cannabis sativa HOM05D008880 ORTHO05D011235 2.6e-34 149.8 221 45.2
CANSAT64G2559 Cannabis sativa HOM05D008880 ORTHO05D011235 1.5e-29 134.0 150 55.3
CANSAT54G0364 Cannabis sativa HOM05D008880 ORTHO05D011235 4.4e-29 132.5 111 67.6
CANSAT80G1402 Cannabis sativa HOM05D008880 ORTHO05D011235 3.4e-26 122.9 125 56.0
CANSAT25G1515 Cannabis sativa HOM05D008880 ORTHO05D011235 2.9e-25 119.8 108 63.0
CANSAT11G0473 Cannabis sativa HOM05D008880 ORTHO05D011235 6.5e-25 118.6 129 55.8
CANSAT21G1096 Cannabis sativa HOM05D008880 ORTHO05D011235 7.2e-24 115.2 124 54.8
Atru.chr6.681 Acer truncatum HOM05D008880 ORTHO05D011235 4.7e-23 112.5 215 34.9
CANSAT64G2049 Cannabis sativa HOM05D008880 ORTHO05D011235 6.7e-22 108.6 93 61.3
CANSAT01G1740 Cannabis sativa HOM05D008880 ORTHO05D011235 2.2e-20 103.6 104 54.8
Sopen07g019940 Solanum pennellii HOM05D008880 ORTHO05D001544 1.4e-19 100.9 245 30.2
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-18 97.8 245 29.4
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-18 97.4 245 29.4
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 3.5e-18 96.3 245 29.0
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-18 95.5 241 29.5
Sopen11g023840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-17 94.4 245 29.0
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-17 93.6 245 29.0
Atru.chr1.2215 Acer truncatum HOM05D000002 ORTHO05D000001 2.9e-17 93.2 196 29.1
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-15 86.3 226 29.6
ECA248G3129 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-14 84.7 186 31.2
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 1.4e-14 84.3 226 31.4
ECA238G1847 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.8e-14 84.0 185 30.8
TWI56G0460 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 1.8e-14 84.0 232 28.9
TWI34G1618 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 1.2e-13 81.3 226 29.6
PGR031G0672 Punica granatum HOM05D000002 ORTHO05D001544 7.5e-13 78.6 192 28.6
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 9.7e-13 78.2 87 56.3
Manes.17G029910 Manihot esculenta HOM05D008880 ORTHO05D001544 2.8e-12 76.6 168 28.0
Sed0006359 Sechium edule HOM05D013798 ORTHO05D011235 4.8e-12 75.9 138 35.5
TWI53G0611 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 4.8e-12 75.9 218 27.5
TWI56G0777 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 8.2e-12 75.1 228 27.2
PGR031G3187 Punica granatum HOM05D008880 ORTHO05D001544 1.1e-11 74.7 165 30.9
SGA_v2.0_scaffold48G17859 Striga asiatica HOM05D000002 ORTHO05D000001 1.8e-11 73.9 232 28.9
PSO541G2218 Papaver somniferum HOM05D000002 ORTHO05D001544 2.4e-11 73.6 114 36.8
CANSAT54G0321 Cannabis sativa HOM05D008880 ORTHO05D011235 3.1e-11 73.2 119 39.5
Sabra15G0127600 Salix brachista HOM05D000002 ORTHO05D001544 4.1e-11 72.8 220 28.2
Sabra13G0091600 Salix brachista HOM05D000002 ORTHO05D001544 7.0e-11 72.0 220 27.7
Sabra02G0093900 Salix brachista HOM05D000002 ORTHO05D001544 1.2e-10 71.2 220 28.2
Sabra05G0136100 Salix brachista HOM05D000002 ORTHO05D001544 1.2e-10 71.2 220 28.2
Sabra11G0023000 Salix brachista HOM05D000002 ORTHO05D001544 1.2e-10 71.2 220 27.3
Sabra18G0125600 Salix brachista HOM05D000002 ORTHO05D001544 1.2e-10 71.2 220 27.3
SHI16484 Sapria himalayana HOM05D008880 ORTHO05D011235 2.0e-10 70.5 77 48.1
MELO3C029617.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.5e-10 69.7 154 30.5
TWI38G0876 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 4.5e-10 69.3 108 35.2
TWI39G0463 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 7.7e-10 68.6 108 34.3
Sabra10G0050700 Salix brachista HOM05D000002 ORTHO05D001544 1.0e-09 68.2 220 26.8
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.8 201 28.4
MD00G1044200 Malus domestica HOM05D000002 ORTHO05D001544 1.3e-09 67.8 230 26.1
Manes.06G038551 Manihot esculenta HOM05D000002 ORTHO05D001544 1.3e-09 67.8 221 29.9
PSO017G3397 Papaver somniferum HOM05D000002 ORTHO05D001544 1.7e-09 67.4 113 35.4
TWI39G1064 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.7e-09 67.4 122 34.4
CANSAT11G1275 Cannabis sativa HOM05D008880 ORTHO05D011235 2.2e-09 67.0 116 36.2
TWI73G0861 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 2.9e-09 66.6 178 26.4
TAR522G0001 Trochodendron aralioides HOM05D000002 ORTHO05D001544 3.8e-09 66.2 106 37.7
Manes.17G026082 Manihot esculenta HOM05D000002 ORTHO05D001544 5.0e-09 65.9 174 29.9
TWI48G0001 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 1.1e-08 64.7 155 28.4
ECA240G4648 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 64.3 215 27.4
Gorai.007G234500 Gossypium raimondii HOM05D000002 ORTHO05D001544 1.5e-08 64.3 180 23.3
Manes.18G141009 Manihot esculenta HOM05D000002 ORTHO05D001544 1.9e-08 63.9 180 28.3
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 3.2e-08 63.2 247 26.3
Sabra16G0242800 Salix brachista HOM05D000002 ORTHO05D001544 3.2e-08 63.2 198 27.8
GSVIVG01013341001 Vitis vinifera HOM05D000168 ORTHO05D001351 3.2e-08 63.2 59 50.8
CANSAT35G1268 Cannabis sativa HOM05D000004 ORTHO05D000002 4.2e-08 62.8 85 45.9
MELO3C031376.2 Cucumis melo HOM05D020348 ORTHO05D025205 4.2e-08 62.8 96 39.6
Sp5g20870 Schrenkiella parvula HOM05D000002 ORTHO05D001544 4.2e-08 62.8 187 24.1
CANSAT21G0663 Cannabis sativa HOM05D008880 ORTHO05D011235 1.2e-07 61.2 141 31.9
Gorai.010G113500 Gossypium raimondii HOM05D000002 ORTHO05D001544 1.2e-07 61.2 180 23.3
Manes.18G141045 Manihot esculenta HOM05D000002 ORTHO05D001544 1.6e-07 60.8 166 30.1
Sopen05g014770 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 60.8 141 27.0
Migut.C00417 Erythranthe guttata HOM05D000002 ORTHO05D001544 2.1e-07 60.5 178 33.1
MELO3C030135.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.7e-07 60.1 145 27.6
ECA232G1132 Erigeron canadensis HOM05D000002 ORTHO05D001544 2.7e-07 60.1 182 25.3
Sopen08g016350 Solanum pennellii HOM05D000002 ORTHO05D001544 2.7e-07 60.1 139 32.4
ECA240G1770 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.6e-07 59.7 169 26.0
Thhalv10022479m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 6.1e-07 58.9 188 23.9
ECA246G2726 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-07 58.5 210 28.1
Thhalv10024012m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 1.0e-06 58.2 188 23.9
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 57.8 239 26.8
Thhalv10005360m.g Eutrema salsugineum HOM05D000002 ORTHO05D001544 1.4e-06 57.8 188 23.9
CANSAT25G1266 Cannabis sativa HOM05D008880 ORTHO05D011235 1.8e-06 57.4 111 40.5
Sopen08g011630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.0 161 26.1
Sopen08g011640 Solanum pennellii HOM05D008880 ORTHO05D001544 2.3e-06 57.0 161 26.1
Nn2g13203 Nelumbo nucifera HOM05D001889 ORTHO05D000001 3.0e-06 56.6 150 24.7
TWI63G0628 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 4.0e-06 56.2 94 35.1
ECA246G0073 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.5 218 25.7
SHI22864 Sapria himalayana HOM05D000002 ORTHO05D001544 6.8e-06 55.5 87 33.3
Manes.17G035197 Manihot esculenta HOM05D000002 ORTHO05D001544 8.8e-06 55.1 166 28.9


User provided reference genes

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