Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.2e-69 266.5 144 100.0
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 2.3e-62 242.3 144 89.6
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 2.3e-62 242.3 144 88.9
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 3.4e-61 238.4 144 88.2
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 7.5e-61 237.3 144 82.6
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 1.3e-60 236.5 144 81.9
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 3.7e-60 235.0 144 81.9
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 3.7e-60 235.0 144 84.0
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 3.1e-59 231.9 144 86.8
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 5.4e-59 231.1 144 81.9
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 5.4e-59 231.1 144 86.8
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 3.8e-57 224.9 144 80.6
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 3.8e-57 224.9 144 79.2
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 5.0e-57 224.6 144 80.6
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 8.6e-57 223.8 144 78.5
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 1.1e-56 223.4 142 81.0
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.1e-56 223.4 144 79.2
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 3.3e-56 221.9 144 78.5
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 4.3e-56 221.5 144 77.8
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 4.3e-56 221.5 144 77.8
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 4.3e-56 221.5 144 76.4
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 4.3e-56 221.5 144 77.8
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 5.6e-56 221.1 144 77.1
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 5.6e-56 221.1 144 77.1
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 5.6e-56 221.1 144 77.1
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 7.3e-56 220.7 144 78.5
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 2.8e-55 218.8 144 77.8
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 2.8e-55 218.8 144 84.0
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.6e-55 218.4 144 75.0
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 4.7e-55 218.0 144 75.7
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 4.7e-55 218.0 145 82.8
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 6.1e-55 217.6 145 77.9
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 8.0e-55 217.2 143 78.3
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 8.0e-55 217.2 144 77.1
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 1.0e-54 216.9 145 78.6
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.0e-54 216.9 144 75.7
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 1.8e-54 216.1 144 77.1
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.3e-54 215.7 150 73.3
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 3.0e-54 215.3 146 75.3
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 3.0e-54 215.3 146 76.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 75.7
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 75.7
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 3.0e-54 215.3 145 82.1
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 78.5
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 78.5
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 4.0e-54 214.9 145 84.1
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 4.0e-54 214.9 144 76.4
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 5.2e-54 214.5 144 75.7
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 5.2e-54 214.5 146 74.7
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 6.8e-54 214.2 133 80.5
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.2e-53 213.4 144 75.0
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 1.5e-53 213.0 147 78.9
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 1.5e-53 213.0 148 74.3
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.5e-53 213.0 145 79.3
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.5e-53 213.0 144 73.6
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 2.0e-53 212.6 144 72.9
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 80.7
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 2.6e-53 212.2 148 73.6
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 2.6e-53 212.2 148 73.6
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 2.6e-53 212.2 148 73.6
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.6e-53 212.2 146 74.0
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 3.4e-53 211.8 145 75.9
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 3.4e-53 211.8 147 76.9
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 4.4e-53 211.5 145 73.8
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 4.4e-53 211.5 145 74.5
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 5.8e-53 211.1 147 79.6
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 5.8e-53 211.1 144 75.7
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 5.8e-53 211.1 146 76.7
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 9.8e-53 210.3 146 79.5
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 9.8e-53 210.3 145 73.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 9.8e-53 210.3 145 80.0
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.3e-52 209.9 148 80.4
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.3e-52 209.9 140 77.9
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 1.7e-52 209.5 145 75.2
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 2.9e-52 208.8 144 75.0
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 2.9e-52 208.8 144 76.4
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 3.7e-52 208.4 147 80.3
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 3.7e-52 208.4 147 80.3
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 3.7e-52 208.4 148 72.3
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 3.7e-52 208.4 144 73.6
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 4.9e-52 208.0 144 77.1
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 6.4e-52 207.6 144 74.3
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 8.3e-52 207.2 133 78.9
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 8.3e-52 207.2 145 75.2
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 8.3e-52 207.2 131 79.4
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.1e-51 206.8 144 75.0
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.1e-51 206.8 145 75.9
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.4e-51 206.5 147 79.6
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.4e-51 206.5 113 90.3
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 3.2e-51 205.3 152 73.7
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 4.1e-51 204.9 144 73.6
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.1e-51 204.9 146 78.1
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 4.1e-51 204.9 146 76.7
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 5.4e-51 204.5 147 75.5
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 5.4e-51 204.5 147 75.5
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 7.0e-51 204.1 140 73.6
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 7.0e-51 204.1 144 73.6
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 7.0e-51 204.1 145 78.6
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 9.2e-51 203.8 136 75.7
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.2e-50 203.4 144 74.3
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 1.2e-50 203.4 146 74.7
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 1.2e-50 203.4 145 78.6
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 1.6e-50 203.0 144 72.9
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 74.5
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 3.5e-50 201.8 170 65.9
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 3.5e-50 201.8 220 54.1
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 4.6e-50 201.4 144 72.9
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.3e-49 199.9 144 72.2
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.3e-49 199.9 144 72.2
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 3.0e-49 198.7 133 74.4
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.9e-49 198.4 110 87.3
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 8.6e-49 197.2 165 64.2
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.9e-48 196.1 142 71.8
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.9e-48 196.1 144 72.9
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 2.5e-48 195.7 144 72.2
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 7.3e-48 194.1 106 89.6
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 2.1e-47 192.6 143 69.9
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 3.6e-47 191.8 143 75.5
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.6e-45 185.7 175 58.3
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 5.8e-45 184.5 112 80.4
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.1e-43 180.3 116 77.6
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.2e-42 176.8 205 55.1
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 7.8e-42 174.1 92 92.4
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 2.5e-40 169.1 91 91.2
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 1.6e-39 166.4 88 92.0
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 2.1e-39 166.0 108 77.8
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 2.1e-39 166.0 110 75.5
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 2.3e-38 162.5 90 88.9
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 6.4e-36 154.5 109 72.5
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 6.0e-34 147.9 98 81.6
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 9.5e-32 140.6 112 71.4
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.8e-31 139.0 108 61.1
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 3.6e-31 138.7 108 63.9
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.1e-30 135.6 146 61.0
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 1.5e-24 116.7 63 93.7
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 3.3e-24 115.5 108 56.5
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.8e-23 112.5 60 96.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 1.3e-20 103.6 73 67.1
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 9.3e-19 97.4 89 59.6
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 1.2e-18 97.1 86 54.7
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 2.1e-15 86.3 100 46.0
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 8.1e-15 84.3 113 46.9
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.5e-13 80.1 87 46.0
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.7e-12 76.6 63 60.3
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 6.4e-12 74.7 59 62.7
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 2.7e-10 69.3 48 70.8
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 6.0e-10 68.2 35 91.4
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 7.4e-08 61.2 67 49.3
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 8.1e-07 57.8 43 67.4
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 8.1e-07 57.8 43 67.4
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 1.1e-06 57.4 123 33.3
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 6.9e-06 54.7 29 82.8


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