Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 7.6e-141 503.8 254 100.0
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 7.6e-141 503.8 254 100.0
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.5e-101 373.2 253 71.9
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 5.0e-100 368.2 250 73.2
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 3.6e-98 362.1 251 70.9
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.6e-98 362.1 251 70.9
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 6.7e-97 357.8 251 70.5
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 3.1e-94 349.0 249 67.9
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 4.5e-93 345.1 242 71.5
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 5.9e-93 344.7 241 71.4
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 2.2e-92 342.8 243 70.4
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 2.2e-92 342.8 252 69.4
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 2.9e-92 342.4 252 69.0
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 3.8e-92 342.0 251 68.9
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 3.8e-92 342.0 251 70.5
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.0e-92 341.7 259 68.3
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.0e-92 341.7 259 68.3
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 5.0e-92 341.7 246 69.5
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 6.5e-92 341.3 253 69.2
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 8.5e-92 340.9 256 66.4
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 5.5e-91 338.2 239 70.7
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.6e-90 336.7 249 69.5
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.6e-90 336.7 255 69.4
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 1.6e-90 336.7 248 68.5
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 2.7e-90 335.9 248 69.8
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 7.9e-90 334.3 242 69.0
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.0e-89 334.0 246 69.1
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.3e-89 332.8 245 67.8
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 2.3e-89 332.8 240 70.0
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.0e-89 332.4 244 70.5
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 3.0e-89 332.4 244 67.2
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 5.1e-89 331.6 247 68.8
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 5.1e-89 331.6 254 66.5
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 8.8e-89 330.9 243 69.5
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 2.0e-88 329.7 242 69.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 2.0e-88 329.7 242 70.7
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.0e-88 329.7 243 69.1
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 2.0e-88 329.7 242 69.8
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 2.0e-88 329.7 244 68.9
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.4e-88 328.6 247 68.4
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 7.4e-88 327.8 245 66.9
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 7.4e-88 327.8 246 69.5
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 2.2e-87 326.2 245 66.5
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 2.2e-87 326.2 247 67.6
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 2.8e-87 325.9 249 67.9
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 2.8e-87 325.9 243 69.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 4.8e-87 325.1 238 69.7
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 1.1e-86 323.9 287 60.6
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.1e-86 323.9 238 69.3
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.8e-86 323.2 250 64.8
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.4e-86 322.8 237 70.9
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 3.1e-86 322.4 245 66.5
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 4.1e-86 322.0 243 67.1
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.6e-85 320.1 247 66.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 1.6e-85 320.1 240 68.3
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 2.6e-85 319.3 241 67.2
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.6e-85 319.3 238 68.9
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.0e-84 317.4 239 67.8
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 2.2e-84 316.2 250 66.0
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 3.8e-84 315.5 239 66.5
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.9e-83 313.2 237 67.9
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.5e-83 311.6 241 62.7
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 7.2e-83 311.2 237 66.7
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 7.2e-83 311.2 243 63.0
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 9.4e-83 310.8 229 69.9
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.2e-82 310.5 244 62.3
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.6e-82 310.1 240 67.9
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 2.1e-82 309.7 254 62.6
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.7e-82 309.3 235 68.9
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 2.7e-82 309.3 219 69.9
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 2.7e-82 309.3 239 65.7
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 6.1e-82 308.1 245 63.3
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 8.0e-82 307.8 239 67.4
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.0e-81 307.4 239 63.6
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.3e-81 306.2 237 65.8
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 2.3e-81 306.2 243 63.0
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.3e-81 306.2 235 68.5
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 4.0e-81 305.4 243 62.1
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.0e-81 305.4 241 65.6
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 6.7e-81 304.7 243 62.6
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 6.7e-81 304.7 243 62.6
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.5e-80 303.5 243 62.1
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-80 303.5 243 62.6
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-80 303.5 243 62.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.5e-80 303.5 243 62.1
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 2.0e-80 303.1 243 62.1
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 2.0e-80 303.1 243 62.6
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 2.0e-80 303.1 243 61.7
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 9.7e-80 300.8 243 61.3
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 9.7e-80 300.8 243 61.3
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 2.2e-79 299.7 243 61.3
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 6.3e-79 298.1 231 65.4
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 3.5e-77 292.4 257 60.3
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.3e-76 290.4 234 62.0
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.3e-76 290.4 244 61.9
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 2.9e-76 289.3 235 65.5
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 6.5e-76 288.1 246 58.1
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.1e-75 287.3 235 62.1
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 5.5e-75 285.0 245 61.6
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 9.4e-75 284.3 244 61.5
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 1.6e-74 283.5 230 64.3
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 3.6e-74 282.3 196 70.9
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 7.0e-70 268.1 229 58.5
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.2e-69 267.3 197 70.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.0e-68 264.2 317 49.2
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 8.5e-68 261.2 245 58.0
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 9.4e-67 257.7 189 69.3
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.1e-66 256.5 234 54.7
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 4.4e-64 248.8 210 64.8
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 3.7e-63 245.7 239 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 5.0e-60 235.3 231 52.4
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 6.6e-60 235.0 257 52.5
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 9.2e-54 214.5 159 67.3
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.9e-53 211.8 193 59.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 1.9e-51 206.8 241 45.2
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.8e-49 200.3 137 73.0
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 2.0e-48 196.8 231 46.8
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.3e-47 194.1 157 61.1
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 1.2e-45 187.6 135 68.9
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.7e-45 186.4 139 71.2
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 4.1e-38 162.5 131 62.6
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 4.0e-33 146.0 227 37.9
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 8.6e-28 128.3 245 33.1
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 9.9e-24 114.8 83 67.5
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.2e-22 109.8 85 63.5
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 2.7e-21 106.7 142 45.8
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 4.6e-21 105.9 90 60.0
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.5e-19 100.9 82 58.5
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 1.2e-13 81.3 83 53.0
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.7e-13 80.1 63 68.3
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 1.3e-07 61.2 47 61.7
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 2.2e-07 60.5 46 60.9


User provided reference genes

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