Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.1e-292 1009.2 510 100.0
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 8.3e-288 993.0 510 98.6
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.3e-200 703.4 512 69.9
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 3.6e-198 695.3 511 69.5
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 5.9e-193 677.9 499 69.1
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 1.3e-192 676.8 484 70.0
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 8.5e-192 674.1 495 68.7
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 1.0e-189 667.2 508 66.7
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 4.1e-186 655.2 508 65.6
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 2.6e-185 652.5 508 65.6
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 5.0e-184 648.3 496 66.5
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.1e-182 642.9 463 70.0
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 1.1e-178 630.6 497 63.8
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.8e-178 629.8 508 64.6
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 1.5e-172 610.1 494 62.1
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 2.2e-171 606.3 572 57.3
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 1.0e-168 597.4 461 65.9
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 8.6e-168 594.3 493 63.7
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 3.2e-167 592.4 486 61.9
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 5.4e-162 575.1 469 60.3
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 5.4e-154 548.5 472 59.1
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 7.8e-153 544.7 480 59.6
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 3.0e-152 542.7 504 58.3
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.2e-150 537.3 484 59.1
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 8.0e-150 534.6 472 59.5
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 1.5e-148 530.4 485 58.1
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 3.0e-136 489.6 478 56.3
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.8e-134 483.0 402 63.2
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 5.2e-133 478.8 377 63.7
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 2.3e-128 463.4 508 51.2
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 1.9e-127 460.3 473 51.8
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 3.6e-126 456.1 470 49.1
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 8.1e-126 454.9 470 49.1
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 7.3e-119 431.8 473 47.4
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 2.6e-116 423.3 514 47.3
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 4.2e-114 416.0 439 49.0
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 4.2e-114 416.0 408 54.9
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 5.6e-111 405.6 347 62.0
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.9e-107 392.5 324 60.8
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 3.5e-97 359.8 298 63.8
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 6.1e-81 305.8 509 39.1
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 4.4e-63 246.5 182 63.7
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 5.5e-58 229.6 696 29.5
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 7.0e-53 212.6 158 63.9
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 5.0e-51 206.5 224 45.1
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 4.5e-44 183.3 175 61.1
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 3.0e-27 127.5 96 63.5
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.9e-21 108.2 73 71.2
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.8e-17 94.4 82 51.2
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.8e-16 91.7 64 68.8
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 8.9e-16 89.4 61 70.5
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-14 84.3 91 50.5
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.1e-13 82.4 63 60.3
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 4.8e-09 67.0 65 46.2
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 9.0e-08 62.8 248 25.0
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 1.5e-07 62.0 268 24.6
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 5.8e-07 60.1 250 26.0
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 9.9e-07 59.3 251 24.3


User provided reference genes

Program Settings