Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1813 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-147 526.2 256 100.0
CANSAT35G0678 Cannabis sativa HOM05D009472 ORTHO05D000137 8.2e-103 377.5 224 86.2
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 3.1e-102 375.6 286 69.9
CANSAT50G0005 Cannabis sativa HOM05D009472 ORTHO05D000137 2.7e-101 372.5 311 66.2
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 8.9e-89 330.9 304 62.8
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 4.4e-88 328.6 361 53.5
CANSAT54G2039 Cannabis sativa HOM05D009472 ORTHO05D000137 2.2e-87 326.2 216 77.8
CANSAT35G0617 Cannabis sativa HOM05D009472 ORTHO05D000137 2.0e-85 319.7 164 94.5
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 1.7e-68 263.5 309 50.5
CANSAT21G0042 Cannabis sativa HOM05D009472 ORTHO05D000137 5.4e-62 241.9 161 74.5
CANSAT78G0808 Cannabis sativa HOM05D009472 ORTHO05D000137 2.5e-59 233.0 153 76.5
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 8.4e-47 191.4 361 35.5
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 8.4e-47 191.4 339 37.5
CANSAT64G1982 Cannabis sativa HOM05D009472 ORTHO05D000137 2.7e-37 159.8 232 42.7
CANSAT21G1289 Cannabis sativa HOM05D009472 ORTHO05D000137 1.6e-34 150.6 323 34.7
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 3.7e-26 122.9 341 30.5
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 4.0e-25 119.4 146 47.9
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 4.0e-25 119.4 146 47.9
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 9.0e-25 118.2 146 47.3
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 2.2e-23 113.6 279 37.3
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 3.5e-21 106.3 285 29.1
CANSAT54G2657 Cannabis sativa HOM05D009472 ORTHO05D000137 1.1e-19 101.3 200 38.0
CANSAT80G0147 Cannabis sativa HOM05D017160 ORTHO05D000137 1.5e-19 100.9 81 59.3
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 4.3e-19 99.4 99 52.5
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 6.9e-17 92.0 42 100.0
CANSAT54G1856 Cannabis sativa HOM05D009472 ORTHO05D000137 3.2e-14 83.2 103 45.6
CANSAT80G2520 Cannabis sativa HOM05D017160 ORTHO05D013047 3.2e-14 83.2 105 45.7
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 1.8e-12 77.4 160 35.0
Nitab4.5_0007904g0010 Nicotiana tabacum HOM05D008636 ORTHO05D000137 2.3e-12 77.0 192 29.7
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 2.3e-12 77.0 189 30.7
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 6.7e-12 75.5 149 33.6
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 8.8e-12 75.1 160 33.8
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-11 73.6 164 31.7
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-11 73.6 149 33.6
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 7.4e-11 72.0 146 34.9
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-10 71.2 157 31.8
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 2.2e-10 70.5 229 28.8
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.3e-10 68.9 141 34.0
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 5.3e-09 65.9 178 30.9
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 6.9e-09 65.5 150 33.3
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 6.9e-09 65.5 150 33.3
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 6.9e-09 65.5 150 33.3
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 6.9e-09 65.5 150 33.3
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 9.1e-09 65.1 186 33.3
Oeu047965.1 Olea europaea HOM05D002749 ORTHO05D000708 9.1e-09 65.1 144 29.2
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.2e-08 64.7 157 31.8
Oeu002342.1 Olea europaea HOM05D002749 ORTHO05D000708 2.0e-08 63.9 133 31.6
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 2.6e-08 63.5 178 32.6
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 3.4e-08 63.2 152 34.2
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 3.4e-08 63.2 178 32.6
Oeu032773.1 Olea europaea HOM05D002749 ORTHO05D000708 5.9e-08 62.4 81 34.6
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 7.7e-08 62.0 130 33.1
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 7.7e-08 62.0 108 37.0
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 1.0e-07 61.6 145 33.8
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 1.0e-07 61.6 145 33.8
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.3e-07 61.2 145 33.8
Nitab4.5_0001425g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-07 61.2 136 33.1
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-07 61.2 62 50.0
PGSC0003DMG400044701 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.3e-07 61.2 135 36.3
CAN.G165.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-07 60.8 146 28.8
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.7e-07 60.8 77 44.2
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.7e-07 60.8 135 34.8
CANSAT25G1366 Cannabis sativa HOM05D008636 ORTHO05D000137 2.2e-07 60.5 177 32.2
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 2.2e-07 60.5 41 63.4
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-07 60.1 134 33.6
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-07 60.1 136 35.3
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 2.9e-07 60.1 62 45.2
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 3.8e-07 59.7 169 32.0
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.8e-07 59.7 143 36.4
SGA_v2.0_scaffold2G00971 Striga asiatica HOM05D000679 ORTHO05D000137 3.8e-07 59.7 115 35.7
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.0e-07 59.3 145 31.7
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.5e-07 58.9 137 33.6
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 6.5e-07 58.9 161 31.7
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 6.5e-07 58.9 161 31.7
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 6.5e-07 58.9 161 31.7
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 6.5e-07 58.9 148 33.8
CANSAT35G1242 Cannabis sativa HOM05D000679 ORTHO05D000137 8.5e-07 58.5 42 59.5
Nitab4.5_0000125g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.5e-07 58.5 136 33.1
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 1.1e-06 58.2 77 41.6
Oeu060593.1 Olea europaea HOM05D002749 ORTHO05D000708 1.4e-06 57.8 86 36.0
Solyc09g150106.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.4e-06 57.8 77 35.1
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-06 57.8 61 49.2
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 1.4e-06 57.8 90 37.8
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-06 57.0 138 31.9
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-06 57.0 84 39.3
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-06 56.6 136 33.8
Oeu008075.1 Olea europaea HOM05D002749 ORTHO05D000708 4.2e-06 56.2 183 24.0
Oeu001737.1 Olea europaea HOM05D002749 ORTHO05D000708 5.5e-06 55.8 103 29.1
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 5.5e-06 55.8 182 24.7
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 5.5e-06 55.8 152 25.7
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 5.5e-06 55.8 90 36.7
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.5e-06 55.8 148 33.1
CANSAT01G2792 Cannabis sativa HOM05D008636 ORTHO05D000137 7.2e-06 55.5 90 37.8
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 7.2e-06 55.5 90 37.8
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 7.2e-06 55.5 140 33.6
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 9.4e-06 55.1 90 37.8
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 9.4e-06 55.1 152 25.7
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 9.4e-06 55.1 152 25.7
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 9.4e-06 55.1 77 40.3
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 9.4e-06 55.1 152 25.7


User provided reference genes

Program Settings