Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1775 Cannabis sativa HOM05D000051 ORTHO05D010453 5.5e-173 610.9 319 100.0
CANSAT80G0269 Cannabis sativa HOM05D000051 ORTHO05D010453 5.3e-91 338.6 251 72.1
CANSAT80G2895 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-87 327.4 253 69.6
CANSAT80G2757 Cannabis sativa HOM05D000051 ORTHO05D010453 4.8e-84 315.5 248 67.7
CANSAT80G0605 Cannabis sativa HOM05D000051 ORTHO05D010453 9.0e-83 311.2 248 66.9
CANSAT80G2743 Cannabis sativa HOM05D000051 ORTHO05D010453 2.9e-81 306.2 266 62.4
CANSAT80G1555 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-80 303.1 249 65.5
CANSAT80G1381 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-79 300.4 251 65.7
CANSAT80G0772 Cannabis sativa HOM05D000051 ORTHO05D010453 5.1e-78 295.4 283 55.5
CANSAT80G0613 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-77 293.1 256 61.7
CANSAT80G0468 Cannabis sativa HOM05D000051 ORTHO05D010453 5.1e-70 268.9 242 59.9
CANSAT80G0872 Cannabis sativa HOM05D000051 ORTHO05D010453 4.5e-66 255.8 251 57.0
CANSAT80G1127 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-64 250.0 251 56.2
CANSAT80G0894 Cannabis sativa HOM05D000051 ORTHO05D010453 9.4e-64 248.1 252 54.0
CANSAT80G2796 Cannabis sativa HOM05D000051 ORTHO05D010453 2.7e-63 246.5 276 54.0
CANSAT80G0656 Cannabis sativa HOM05D000051 ORTHO05D010453 4.7e-63 245.7 293 50.5
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 6.7e-62 241.9 257 55.6
CANSAT80G2502 Cannabis sativa HOM05D000051 ORTHO05D010453 2.7e-58 229.9 250 54.0
CANSAT80G2918 Cannabis sativa HOM05D000051 ORTHO05D010453 7.7e-58 228.4 246 53.3
CANSAT56G0180 Cannabis sativa HOM05D000051 ORTHO05D010453 2.5e-56 223.4 268 50.0
CANSAT80G1164 Cannabis sativa HOM05D000051 ORTHO05D010453 7.2e-56 221.9 253 50.6
CANSAT78G1945 Cannabis sativa HOM05D000051 ORTHO05D010453 8.0e-55 218.4 260 47.7
CANSAT54G1299 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-54 216.5 293 47.4
CANSAT56G3036 Cannabis sativa HOM05D000051 ORTHO05D010453 3.4e-53 213.0 254 50.8
CANSAT80G2327 Cannabis sativa HOM05D000051 ORTHO05D010453 9.8e-53 211.5 247 49.0
CANSAT54G0219 Cannabis sativa HOM05D000051 ORTHO05D010453 4.5e-50 202.6 254 48.8
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 1.5e-48 197.6 253 46.2
CANSAT54G2109 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-47 194.5 266 44.4
CANSAT56G4105 Cannabis sativa HOM05D000051 ORTHO05D010453 3.6e-47 193.0 254 46.9
CANSAT54G2020 Cannabis sativa HOM05D000051 ORTHO05D010453 5.2e-46 189.1 277 44.4
CANSAT54G2277 Cannabis sativa HOM05D000051 ORTHO05D010453 5.2e-46 189.1 258 46.9
CANSAT54G2031 Cannabis sativa HOM05D000051 ORTHO05D010453 2.0e-45 187.2 293 42.7
CANSAT54G0861 Cannabis sativa HOM05D000051 ORTHO05D010453 4.4e-45 186.0 256 46.5
CANSAT54G2522 Cannabis sativa HOM05D000051 ORTHO05D010453 7.5e-45 185.3 253 47.0
CANSAT54G0961 Cannabis sativa HOM05D000051 ORTHO05D010453 9.8e-45 184.9 271 43.9
CANSAT54G0844 Cannabis sativa HOM05D000051 ORTHO05D010453 8.3e-44 181.8 253 45.5
CANSAT80G1807 Cannabis sativa HOM05D000051 ORTHO05D010453 1.8e-43 180.6 191 55.5
CANSAT54G1896 Cannabis sativa HOM05D000051 ORTHO05D010453 2.4e-43 180.3 261 45.2
CANSAT54G1220 Cannabis sativa HOM05D000051 ORTHO05D010453 3.1e-43 179.9 253 43.9
CANSAT54G1936 Cannabis sativa HOM05D000051 ORTHO05D010453 2.6e-37 160.2 139 55.4
CANSAT54G0089 Cannabis sativa HOM05D000051 ORTHO05D010453 4.6e-34 149.4 231 42.9
CANSAT54G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 5.6e-32 142.5 442 30.1
CANSAT56G0132 Cannabis sativa HOM05D000051 ORTHO05D010453 5.8e-29 132.5 176 49.4
CANSAT80G0932 Cannabis sativa HOM05D000051 ORTHO05D010453 5.8e-29 132.5 113 56.6
CANSAT56G0651 Cannabis sativa HOM05D000051 ORTHO05D010453 6.0e-26 122.5 187 46.5
CANSAT54G1939 Cannabis sativa HOM05D000051 ORTHO05D010453 6.6e-25 119.0 115 52.2
CANSAT54G2717 Cannabis sativa HOM05D000051 ORTHO05D010453 6.6e-25 119.0 115 52.2
CANSAT54G0519 Cannabis sativa HOM05D000051 ORTHO05D010453 1.9e-24 117.5 115 51.3
CANSAT54G1088 Cannabis sativa HOM05D000051 ORTHO05D010453 1.9e-24 117.5 118 50.0
CANSAT80G2121 Cannabis sativa HOM05D000051 ORTHO05D010453 1.1e-22 111.7 134 50.7
CANSAT54G1190 Cannabis sativa HOM05D000051 ORTHO05D010453 1.9e-16 90.9 121 42.1
CANSAT54G2718 Cannabis sativa HOM05D000051 ORTHO05D010453 1.2e-15 88.2 165 39.4
CANSAT64G1176 Cannabis sativa HOM05D000051 ORTHO05D010453 1.9e-11 74.3 342 26.3
Duzib133G1329 Durio zibethinus HOM05D001243 ORTHO05D000843 2.4e-11 73.9 228 29.8
CANSAT54G2358 Cannabis sativa HOM05D000051 ORTHO05D010453 3.2e-11 73.6 81 45.7
TWI53G1441 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 3.9e-09 66.6 213 27.2
Peaxi162Scf00421g00336 Petunia axillaris HOM05D001374 ORTHO05D001182 6.6e-09 65.9 294 25.5
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.5e-08 64.7 233 25.3
QL01p017812 Quercus lobata HOM05D001477 ORTHO05D001182 2.5e-08 63.9 359 26.5
Aqoxy2G02548 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.6e-08 62.8 294 25.5
Prupe.4G160800 Prunus persica HOM05D000051 ORTHO05D000015 5.6e-08 62.8 37 78.4
arahy.Tifrunner.gnm1.ann1.X0IXNE Arachis hypogaea HOM05D000051 ORTHO05D000015 7.3e-08 62.4 79 45.6
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 1.6e-07 61.2 233 25.3
Nn1g07075 Nelumbo nucifera HOM05D000051 ORTHO05D000015 2.8e-07 60.5 340 24.4
C04p56380 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-07 59.7 299 23.4
Oeu036484.2 Olea europaea HOM05D000051 ORTHO05D000015 4.7e-07 59.7 360 24.2
PSO210G3626 Papaver somniferum HOM05D000051 ORTHO05D000015 6.2e-07 59.3 310 28.4
CANSAT64G2494 Cannabis sativa HOM05D000051 ORTHO05D001182 1.1e-06 58.5 50 56.0
BolC7t44117H Brassica oleracea HOM05D000051 ORTHO05D000015 1.4e-06 58.2 148 32.4
Medtr3g114200 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-06 58.2 43 58.1
Aa31LG7G1950 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.8e-06 57.8 292 26.7
BcaC06g33876 Brassica carinata HOM05D000051 ORTHO05D000015 1.8e-06 57.8 44 59.1
C07p36000 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 57.8 144 34.0
BolC7t44116H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-06 57.8 44 59.1
BolC5t30229H Brassica oleracea HOM05D000051 ORTHO05D000015 2.4e-06 57.4 283 26.1
Medtr3g019180 Medicago truncatula HOM05D001243 ORTHO05D000843 2.4e-06 57.4 199 28.6
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 3.1e-06 57.0 151 30.5
Psat0s2525g0080 Pisum sativum HOM05D000051 ORTHO05D000015 3.1e-06 57.0 164 29.3
arahy.Tifrunner.gnm1.ann1.J3P11A Arachis hypogaea HOM05D000051 ORTHO05D000015 4.0e-06 56.6 52 50.0
CAN.G723.10 Capsicum annuum HOM05D001477 ORTHO05D028500 4.0e-06 56.6 198 31.3
AL8G15370 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.2e-06 56.2 99 38.4
arahy.Tifrunner.gnm1.ann1.F751SF Arachis hypogaea HOM05D000051 ORTHO05D000015 5.2e-06 56.2 42 59.5
Dinv21722 Davidia involucrata HOM05D000051 ORTHO05D000015 5.2e-06 56.2 37 67.6
Atru.chr1.2844 Acer truncatum HOM05D001477 ORTHO05D001182 6.8e-06 55.8 241 29.0
AL8G32680 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-06 55.8 125 32.8
Psat5g064440 Pisum sativum HOM05D000051 ORTHO05D000015 6.8e-06 55.8 35 71.4
QL08p011390 Quercus lobata HOM05D000051 ORTHO05D000015 6.8e-06 55.8 42 59.5
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 8.9e-06 55.5 99 36.4
Dinv17488 Davidia involucrata HOM05D000051 ORTHO05D000015 8.9e-06 55.5 41 63.4
FAN16G3673 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.9e-06 55.5 49 59.2
Hma1.2p1_2457F.1_g322490 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 8.9e-06 55.5 274 23.4
Medtr3g087260 Medicago truncatula HOM05D000051 ORTHO05D000015 8.9e-06 55.5 153 32.0
QL08p011216 Quercus lobata HOM05D000051 ORTHO05D000015 8.9e-06 55.5 34 70.6
QL08p019904 Quercus lobata HOM05D000051 ORTHO05D000015 8.9e-06 55.5 53 52.8
Rhsim07G0244500 Rhododendron simsii HOM05D001477 ORTHO05D011640 8.9e-06 55.5 266 24.1


User provided reference genes

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