Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1599 Cannabis sativa HOM05D000003 ORTHO05D009135 9.5e-138 493.4 237 100.0
CANSAT25G1408 Cannabis sativa HOM05D000003 ORTHO05D009135 8.8e-75 284.3 217 62.7
CANSAT54G1284 Cannabis sativa HOM05D000003 ORTHO05D009135 6.3e-73 278.1 217 59.4
CANSAT54G2053 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-72 275.8 217 59.4
CANSAT80G1739 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-72 274.2 217 59.4
CANSAT21G1229 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-71 273.9 217 59.4
CANSAT80G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 2.6e-71 272.7 217 57.1
CANSAT56G3612 Cannabis sativa HOM05D000003 ORTHO05D009135 4.5e-71 271.9 217 56.7
CANSAT25G0817 Cannabis sativa HOM05D000003 ORTHO05D009135 1.3e-70 270.4 217 59.0
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-70 270.4 217 57.6
CANSAT56G4095 Cannabis sativa HOM05D000003 ORTHO05D009135 8.5e-70 267.7 217 59.4
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 1.9e-69 266.5 217 58.1
CANSAT64G0259 Cannabis sativa HOM05D000003 ORTHO05D009135 3.2e-69 265.8 217 58.1
CANSAT35G0741 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-68 262.7 217 59.0
CANSAT56G3921 Cannabis sativa HOM05D000003 ORTHO05D009135 8.0e-68 261.2 217 56.7
CANSAT80G0717 Cannabis sativa HOM05D000003 ORTHO05D009135 8.0e-68 261.2 217 56.7
CANSAT54G1958 Cannabis sativa HOM05D000003 ORTHO05D009135 1.0e-67 260.8 217 57.1
CANSAT25G2900 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-67 260.0 217 56.2
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-67 259.6 217 57.6
CANSAT11G2464 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-67 259.6 217 56.7
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 5.2e-67 258.5 221 53.8
CANSAT21G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 2.6e-66 256.1 217 54.4
CANSAT35G0598 Cannabis sativa HOM05D000003 ORTHO05D009135 3.4e-66 255.8 217 55.3
CANSAT78G1876 Cannabis sativa HOM05D000003 ORTHO05D009135 4.4e-66 255.4 218 55.0
CANSAT80G2381 Cannabis sativa HOM05D000003 ORTHO05D009135 4.4e-66 255.4 217 54.8
CANSAT56G3302 Cannabis sativa HOM05D000003 ORTHO05D009135 9.7e-66 254.2 217 55.3
CANSAT25G1631 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-65 252.7 222 53.6
CANSAT80G1247 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-65 252.7 217 54.4
CANSAT25G1842 Cannabis sativa HOM05D000003 ORTHO05D009135 4.8e-65 251.9 217 52.1
CANSAT80G1515 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-64 250.8 218 54.1
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-64 250.0 217 53.0
CANSAT54G1882 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-64 247.7 217 53.0
CANSAT25G2107 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-63 247.3 221 52.5
CANSAT25G3181 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-63 247.3 217 53.9
CANSAT56G0966 Cannabis sativa HOM05D000003 ORTHO05D009135 3.8e-62 242.3 222 50.9
CANSAT80G2177 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-61 240.4 222 50.5
CANSAT25G2803 Cannabis sativa HOM05D000003 ORTHO05D009135 4.2e-61 238.8 180 62.2
CANSAT64G3001 Cannabis sativa HOM05D000003 ORTHO05D009135 4.2e-61 238.8 217 54.4
CANSAT78G0547 Cannabis sativa HOM05D000003 ORTHO05D009135 5.5e-61 238.4 217 51.6
CANSAT01G1354 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-60 235.7 222 48.6
CANSAT35G0782 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-60 235.0 218 53.2
CANSAT25G0840 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-59 233.8 185 57.8
CANSAT35G0351 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-59 233.4 189 58.2
CANSAT78G1763 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-59 231.5 217 53.0
CANSAT54G2588 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-58 230.7 222 48.6
CANSAT01G2742 Cannabis sativa HOM05D000003 ORTHO05D009135 2.0e-58 229.9 217 47.9
CANSAT80G0829 Cannabis sativa HOM05D000003 ORTHO05D009135 9.8e-58 227.6 222 49.5
CANSAT35G0307 Cannabis sativa HOM05D000003 ORTHO05D009135 1.3e-57 227.3 222 49.1
CANSAT54G0730 Cannabis sativa HOM05D000003 ORTHO05D009135 1.7e-57 226.9 185 55.7
CANSAT21G0418 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-57 226.1 185 54.6
CANSAT21G0795 Cannabis sativa HOM05D000003 ORTHO05D009135 3.7e-57 225.7 185 54.6
CANSAT80G1498 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-56 221.1 205 48.8
CANSAT21G1566 Cannabis sativa HOM05D000003 ORTHO05D009135 4.5e-55 218.8 208 49.5
CANSAT25G2466 Cannabis sativa HOM05D000003 ORTHO05D009135 5.5e-53 211.8 203 49.3
CANSAT11G2175 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-50 202.6 160 56.9
CANSAT54G2970 Cannabis sativa HOM05D000003 ORTHO05D009135 5.7e-50 201.8 163 57.7
CANSAT11G2638 Cannabis sativa HOM05D000003 ORTHO05D009135 4.9e-49 198.7 217 48.4
CANSAT64G2935 Cannabis sativa HOM05D000003 ORTHO05D009135 4.1e-48 195.7 195 48.2
CANSAT56G1897 Cannabis sativa HOM05D000003 ORTHO05D009135 7.8e-47 191.4 217 47.0
CANSAT78G2330 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-47 191.4 217 45.2
CANSAT54G2263 Cannabis sativa HOM05D000003 ORTHO05D009135 1.7e-46 190.3 185 47.6
CANSAT11G1107 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-44 184.1 217 46.1
CANSAT64G1459 Cannabis sativa HOM05D000003 ORTHO05D009135 6.1e-44 181.8 222 40.1
CANSAT25G1229 Cannabis sativa HOM05D000003 ORTHO05D009135 9.2e-40 167.9 147 55.1
CANSAT25G1317 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-39 167.2 217 40.6
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-36 157.5 217 42.4
CANSAT01G2083 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-35 153.3 131 56.5
CANSAT64G1019 Cannabis sativa HOM05D000003 ORTHO05D009135 3.4e-34 149.4 137 51.8
CANSAT21G1440 Cannabis sativa HOM05D000342 ORTHO05D009135 4.1e-32 142.5 117 59.0
CANSAT56G1411 Cannabis sativa HOM05D000003 ORTHO05D009135 2.7e-31 139.8 192 36.5
CANSAT54G2188 Cannabis sativa HOM05D000003 ORTHO05D009135 2.1e-28 130.2 217 39.6
CANSAT78G0448 Cannabis sativa HOM05D000003 ORTHO05D009135 2.2e-25 120.2 122 50.8
CANSAT56G3239 Cannabis sativa HOM05D000003 ORTHO05D009135 7.1e-24 115.2 83 59.0
CANSAT35G1320 Cannabis sativa HOM05D000003 ORTHO05D000004 9.2e-24 114.8 222 32.4
CANSAT11G1105 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-23 112.5 85 60.0
CANSAT80G2845 Cannabis sativa HOM05D000003 ORTHO05D009135 4.6e-23 112.5 77 62.3
CANSAT01G1707 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-22 110.2 74 67.6
CANSAT25G2265 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-22 109.4 201 34.8
CANSAT80G1047 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-21 107.8 93 53.8
CANSAT25G0124 Cannabis sativa HOM05D000003 ORTHO05D009135 3.1e-19 99.8 99 45.5
CANSAT25G3500 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-18 97.4 82 50.0
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-17 93.2 183 35.0
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-16 88.6 234 29.1
CANSAT21G0492 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-15 87.0 227 26.9
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-15 87.0 223 29.1
Hma1.2p1_0035F.1_g021825 Hydrangea macrophylla HOM05D000003 ORTHO05D000004 3.5e-15 86.3 229 29.7
QL06p043215 Quercus lobata HOM05D000529 ORTHO05D000472 6.0e-15 85.5 180 28.9
CANSAT11G0641 Cannabis sativa HOM05D000003 ORTHO05D009135 3.9e-14 82.8 224 26.3
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-12 77.8 224 25.0
CANSAT01G1024 Cannabis sativa HOM05D000003 ORTHO05D009135 1.6e-12 77.4 222 24.3
PSO017G3684 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-12 77.0 234 24.4
CiPaw.13G111200 Carya illinoinensis HOM05D000003 ORTHO05D009135 8.1e-12 75.1 242 25.6
TWI81G0692 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 2.4e-11 73.6 212 25.9
PSO170G3074 Papaver somniferum HOM05D000003 ORTHO05D001026 4.0e-11 72.8 228 27.2
PSO170G2843 Papaver somniferum HOM05D000003 ORTHO05D001026 5.3e-11 72.4 229 26.6
PSO675G7015 Papaver somniferum HOM05D000003 ORTHO05D001026 6.9e-11 72.0 233 24.5
PSO339G1049 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-09 67.8 180 27.8
CANSAT25G0139 Cannabis sativa HOM05D000128 ORTHO05D000059 1.7e-09 67.4 230 25.2
CANSAT80G1965 Cannabis sativa HOM05D000039 ORTHO05D001729 1.7e-09 67.4 57 61.4
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 1.7e-09 67.4 236 24.2
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.8e-09 66.2 236 25.4
PSO573G0006 Papaver somniferum HOM05D000003 ORTHO05D001026 4.9e-09 65.9 230 23.9
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 8.4e-09 65.1 238 24.4
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 64.3 216 26.4
TWI15G0167 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 2.4e-08 63.5 224 26.8
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-08 62.8 196 25.5
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 5.4e-08 62.4 224 27.2
PSO761G0007 Papaver somniferum HOM05D000003 ORTHO05D001026 7.1e-08 62.0 225 22.7
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 1.6e-07 60.8 222 23.4
EL10Ac9g23004 Beta vulgaris HOM05D000003 ORTHO05D000004 2.1e-07 60.5 233 23.2
CANSAT11G1408 Cannabis sativa HOM05D000003 ORTHO05D009135 4.6e-07 59.3 81 34.6
PSO063G2448 Papaver somniferum HOM05D007919 ORTHO05D006738 4.6e-07 59.3 153 28.8
Aqoxy4G00931 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 7.9e-07 58.5 178 28.1
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 7.9e-07 58.5 223 27.8
PSO478G1072 Papaver somniferum HOM05D000003 ORTHO05D001026 7.9e-07 58.5 234 24.8
Atru.chr10.394 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.2 211 26.5
PSO339G3891 Papaver somniferum HOM05D009877 ORTHO05D000004 1.0e-06 58.2 126 32.5
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-06 57.8 78 35.9
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-06 57.4 93 32.3
PSO170G5422 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-06 57.0 205 25.9
PSO675G5491 Papaver somniferum HOM05D000003 ORTHO05D001026 2.3e-06 57.0 207 25.1
TWI73G0025 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 2.3e-06 57.0 211 24.2
PSO532G0007 Papaver somniferum HOM05D003407 ORTHO05D001026 3.0e-06 56.6 237 22.4
QL04p006933 Quercus lobata HOM05D015023 ORTHO05D014255 3.0e-06 56.6 159 25.8
RcHm_v2.0_Chr7g0206171 Rosa chinensis HOM05D005989 ORTHO05D000022 3.0e-06 56.6 247 21.5
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 55.8 249 24.9
TAR351G0004 Trochodendron aralioides HOM05D000003 ORTHO05D009135 5.1e-06 55.8 224 24.1
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 6.6e-06 55.5 245 23.3
QL11p053095 Quercus lobata HOM05D000003 ORTHO05D000167 6.6e-06 55.5 221 24.0
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 8.7e-06 55.1 88 36.4
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 8.7e-06 55.1 82 34.1


User provided reference genes

Program Settings