Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 3.9e-51 204.5 104 100.0
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 4.0e-40 167.9 103 78.6
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.2e-39 166.4 104 76.9
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 5.8e-39 164.1 102 78.4
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 7.6e-39 163.7 99 80.8
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.2e-38 162.2 104 76.0
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 6.4e-38 160.6 104 78.8
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 8.4e-38 160.2 101 77.2
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 5.4e-37 157.5 103 73.8
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 7.1e-37 157.1 101 75.2
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 9.3e-37 156.8 104 74.0
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 9.3e-37 156.8 104 74.0
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 2.7e-36 155.2 101 77.2
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 6.0e-36 154.1 103 73.8
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.0e-35 153.3 96 78.1
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 1.3e-35 152.9 103 74.8
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 3.9e-35 151.4 104 71.2
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 1.9e-34 149.1 102 70.6
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 1.9e-34 149.1 105 72.4
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 2.5e-34 148.7 105 72.4
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 9.6e-34 146.7 105 73.3
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 9.6e-34 146.7 100 75.0
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 1.3e-33 146.4 104 69.2
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 2.1e-33 145.6 105 72.4
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 2.8e-33 145.2 104 72.1
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 3.7e-33 144.8 107 70.1
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.7e-33 144.8 105 71.4
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.2e-33 144.1 105 71.4
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 8.1e-33 143.7 102 72.5
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 3.1e-32 141.7 107 70.1
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 4.0e-32 141.4 102 66.7
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 6.9e-32 140.6 101 69.3
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 9.0e-32 140.2 101 68.3
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 9.0e-32 140.2 101 68.3
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.2e-31 139.8 101 67.3
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.2e-31 139.8 101 68.3
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 1.2e-31 139.8 101 68.3
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 1.2e-31 139.8 101 68.3
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.5e-31 139.4 101 69.3
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 2.0e-31 139.0 101 69.3
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.6e-31 138.7 101 67.3
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 2.6e-31 138.7 101 67.3
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.6e-31 138.7 101 67.3
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.6e-31 138.7 101 67.3
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 4.5e-31 137.9 101 68.3
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 4.5e-31 137.9 101 68.3
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 7.6e-31 137.1 101 68.3
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.0e-30 136.7 104 65.4
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.3e-30 136.3 100 68.0
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.3e-30 136.3 101 67.3
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.7e-30 136.0 104 66.3
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 1.7e-30 136.0 104 65.4
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.9e-30 135.2 104 66.3
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 4.9e-30 134.4 105 66.7
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 6.5e-30 134.0 104 64.4
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 8.4e-30 133.7 105 67.6
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 8.4e-30 133.7 105 66.7
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 8.4e-30 133.7 104 66.3
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 1.1e-29 133.3 100 66.0
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 1.9e-29 132.5 100 67.0
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 1.9e-29 132.5 104 66.3
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 3.2e-29 131.7 100 68.0
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 64.4
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 5.5e-29 131.0 103 69.9
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 5.5e-29 131.0 104 63.5
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 7.1e-29 130.6 95 69.5
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 9.3e-29 130.2 104 68.3
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 1.2e-28 129.8 102 64.7
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.2e-28 129.8 122 61.5
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 2.7e-28 128.6 102 65.7
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 3.5e-28 128.3 104 64.4
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 6.0e-28 127.5 104 64.4
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 6.0e-28 127.5 105 62.9
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 7.9e-28 127.1 106 61.3
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.3e-27 126.3 105 62.9
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 2.3e-27 125.6 96 68.8
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 3.0e-27 125.2 100 65.0
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 6.7e-27 124.0 105 61.0
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 8.7e-27 123.6 103 62.1
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 2.1e-25 119.0 81 76.5
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 1.8e-24 115.9 103 60.2
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 3.1e-24 115.2 89 65.2
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 4.1e-24 114.8 102 58.8
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 5.3e-24 114.4 111 57.7
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.2e-23 113.2 96 62.5
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 1.5e-23 112.8 109 56.0
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.6e-23 112.1 104 56.7
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 2.9e-22 108.6 81 66.7
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 3.8e-22 108.2 100 58.0
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 8.4e-22 107.1 81 65.4
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 4.2e-21 104.8 67 79.1
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 1.2e-20 103.2 67 71.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 6.1e-20 100.9 67 76.1
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 7.9e-20 100.5 67 74.6
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 3.9e-19 98.2 64 76.6
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.5e-18 96.3 67 73.1
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 5.7e-18 94.4 66 71.2
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.6e-17 92.8 80 58.8
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 6.3e-17 90.9 104 53.8
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 6.9e-16 87.4 60 73.3
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.5e-15 86.3 83 66.3
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 2.6e-15 85.5 52 82.7
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 3.4e-15 85.1 50 86.0
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 2.2e-14 82.4 50 82.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-13 78.2 53 79.2
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 2.7e-12 75.5 53 69.8
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 7.4e-10 67.4 104 39.4
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.8e-09 64.7 39 82.1
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 4.5e-07 58.2 60 48.3


User provided reference genes

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