Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1413 Cannabis sativa HOM05D006485 ORTHO05D006108 4.2e-104 382.9 551 100.0
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 7.2e-11 73.2 136 41.2
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 1.0e-09 69.3 131 37.4
ClCG10G019560 Citrullus lanatus HOM05D006485 ORTHO05D006108 2.3e-09 68.2 130 38.5
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 2.3e-09 68.2 65 53.8
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 6.7e-09 66.6 107 43.9
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 8.8e-09 66.2 64 59.4
COL.COLO4_22277 Corchorus olitorius HOM05D006485 ORTHO05D006108 8.8e-09 66.2 51 56.9
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 8.8e-09 66.2 106 42.5
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 8.8e-09 66.2 96 44.8
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 1.5e-08 65.5 66 54.5
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 4.3e-08 63.9 110 40.0
Cfa016502 Carpinus fangiana HOM05D006485 ORTHO05D006108 5.7e-08 63.5 59 54.2
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.7e-07 62.0 61 55.7
A05p09230 Brassica napus HOM05D006485 ORTHO05D006108 1.7e-07 62.0 110 38.2
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 2.8e-07 61.2 110 37.3
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 2.8e-07 61.2 103 41.7
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 2.8e-07 61.2 57 57.9
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 6.3e-07 60.1 54 51.9
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 6.3e-07 60.1 137 36.5
Glyma.10G064400 Glycine max HOM05D013674 ORTHO05D006108 8.2e-07 59.7 168 36.3
Gohir.A09G142800 Gossypium hirsutum HOM05D006485 ORTHO05D006108 1.1e-06 59.3 154 34.4
CARHR130920 Cardamine hirsuta HOM05D006485 ORTHO05D006108 1.4e-06 58.9 110 35.5
Lalb_Chr06g0172031 Lupinus albus HOM05D013674 ORTHO05D006108 1.4e-06 58.9 139 38.1
arahy.Tifrunner.gnm1.ann1.I5PMLK Arachis hypogaea HOM05D036014 ORTHO05D006108 1.8e-06 58.5 90 43.3
arahy.Tifrunner.gnm1.ann1.MVX6TJ Arachis hypogaea HOM05D036014 ORTHO05D006108 1.8e-06 58.5 90 43.3
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.8e-06 58.5 110 37.3
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 2.4e-06 58.2 137 36.5
Gohir.D09G139000 Gossypium hirsutum HOM05D006485 ORTHO05D006108 2.4e-06 58.2 154 33.8
Psat6g077640 Pisum sativum HOM05D013674 ORTHO05D006108 2.4e-06 58.2 51 54.9
RcHm_v2.0_Chr3g0471651 Rosa chinensis HOM05D006485 ORTHO05D006108 2.4e-06 58.2 85 40.0
Gorai.009G410100 Gossypium raimondii HOM05D006485 ORTHO05D006108 3.1e-06 57.8 145 35.2
Medtr1g061730 Medicago truncatula HOM05D013674 ORTHO05D006108 3.1e-06 57.8 51 54.9
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 3.1e-06 57.8 87 44.8
A04p28050 Brassica napus HOM05D006485 ORTHO05D006108 4.1e-06 57.4 138 34.8
C04p65460 Brassica napus HOM05D006485 ORTHO05D006108 4.1e-06 57.4 138 34.8
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 4.1e-06 57.4 110 35.5
FvH4_6g17400 Fragaria vesca HOM05D006485 ORTHO05D006108 4.1e-06 57.4 137 35.8
Gohir.A04G067600 Gossypium hirsutum HOM05D006485 ORTHO05D006108 4.1e-06 57.4 55 54.5
Gohir.D04G106200 Gossypium hirsutum HOM05D006485 ORTHO05D006108 4.1e-06 57.4 55 54.5
Nitab4.5_0006314g0010 Nicotiana tabacum HOM05D006485 ORTHO05D006108 4.1e-06 57.4 87 43.7
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 5.3e-06 57.0 60 50.0
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 5.3e-06 57.0 68 50.0
PGSC0003DMG400002731 Solanum tuberosum HOM05D006485 ORTHO05D006108 5.3e-06 57.0 57 54.4
BcaB06g28951 Brassica carinata HOM05D006485 ORTHO05D006108 6.9e-06 56.6 123 36.6
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 6.9e-06 56.6 79 46.8
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 6.9e-06 56.6 73 43.8
arahy.Tifrunner.gnm1.ann1.YET5HL Arachis hypogaea HOM05D013121 ORTHO05D015407 9.1e-06 56.2 114 37.7
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.1e-06 56.2 137 35.0
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.1e-06 56.2 137 35.0


User provided reference genes

Program Settings