Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1402 Cannabis sativa HOM05D008880 ORTHO05D011235 7.6e-65 250.4 128 100.0
CANSAT21G0142 Cannabis sativa HOM05D008880 ORTHO05D011235 9.7e-44 180.3 127 71.7
CANSAT64G2389 Cannabis sativa HOM05D008880 ORTHO05D011235 4.8e-43 177.9 127 69.3
CANSAT25G1515 Cannabis sativa HOM05D008880 ORTHO05D011235 2.1e-38 162.5 108 75.9
CANSAT54G0364 Cannabis sativa HOM05D008880 ORTHO05D011235 4.6e-38 161.4 111 73.9
CANSAT21G1096 Cannabis sativa HOM05D008880 ORTHO05D011235 2.3e-37 159.1 126 65.1
CANSAT01G1740 Cannabis sativa HOM05D008880 ORTHO05D011235 2.5e-36 155.6 124 67.7
CANSAT35G0612 Cannabis sativa HOM05D008880 ORTHO05D011235 4.3e-36 154.8 125 63.2
CANSAT11G0103 Cannabis sativa HOM05D008880 ORTHO05D011235 4.1e-34 148.3 127 60.6
CANSAT64G2559 Cannabis sativa HOM05D008880 ORTHO05D011235 9.1e-34 147.1 125 64.0
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 2.3e-29 132.5 85 77.6
CANSAT11G0473 Cannabis sativa HOM05D008880 ORTHO05D011235 8.8e-29 130.6 92 72.8
CANSAT11G0442 Cannabis sativa HOM05D008880 ORTHO05D011235 3.3e-28 128.6 125 56.0
CANSAT80G2087 Cannabis sativa HOM05D008880 ORTHO05D011235 1.4e-26 123.2 125 56.0
CANSAT64G2049 Cannabis sativa HOM05D008880 ORTHO05D011235 5.3e-26 121.3 105 60.0
CANSAT21G0969 Cannabis sativa HOM05D008880 ORTHO05D011235 6.5e-16 87.8 127 43.3
MELO3C029617.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-14 83.6 124 37.1
CANSAT78G0818 Cannabis sativa HOM05D008880 ORTHO05D011235 3.0e-13 79.0 49 77.6
TWI34G1618 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 8.8e-13 77.4 121 34.7
PGR031G1414 Punica granatum HOM05D008880 ORTHO05D001544 1.5e-12 76.6 125 33.6
TWI56G0777 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 7.5e-12 74.3 120 35.0
TWI56G0460 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 1.3e-11 73.6 125 33.6
PGR004G1810 Punica granatum HOM05D008880 ORTHO05D001544 2.2e-11 72.8 121 33.1
MELO3C030135.2 Cucumis melo HOM05D000002 ORTHO05D000001 6.3e-11 71.2 114 32.5
MELO3C034480.2 Cucumis melo HOM05D013798 ORTHO05D011235 2.4e-10 69.3 81 40.7
Atru.chr6.681 Acer truncatum HOM05D008880 ORTHO05D011235 5.4e-10 68.2 81 38.3
TWI53G0611 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 7.0e-10 67.8 106 35.8
PGR004G0150 Punica granatum HOM05D008880 ORTHO05D001544 9.1e-10 67.4 125 29.6
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen07g019940 Solanum pennellii HOM05D008880 ORTHO05D001544 9.1e-10 67.4 124 29.0
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 124 29.0
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 67.0 124 29.0
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 1.6e-09 66.6 124 29.0
Sopen05g014770 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-09 65.9 124 28.2
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-08 63.9 126 31.0
Sopen11g023840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-08 63.9 124 29.0
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 1.0e-08 63.9 120 27.5
Sed0015219 Sechium edule HOM05D013798 ORTHO05D011235 6.5e-08 61.2 115 31.3
Sopen08g011630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-08 60.8 124 26.6
Sopen08g011640 Solanum pennellii HOM05D008880 ORTHO05D001544 8.5e-08 60.8 124 26.6
Sed0006131 Sechium edule HOM05D013798 ORTHO05D011235 1.1e-07 60.5 113 32.7
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 1.9e-07 59.7 103 30.1
Sopen07g011850 Solanum pennellii HOM05D000002 ORTHO05D001544 2.5e-07 59.3 124 25.8
CANSAT54G0185 Cannabis sativa HOM05D008880 ORTHO05D011235 4.2e-07 58.5 37 75.7
PSO266G0024 Papaver somniferum HOM05D008880 ORTHO05D001544 4.2e-07 58.5 126 28.6
PSO266G0078 Papaver somniferum HOM05D008880 ORTHO05D001544 4.2e-07 58.5 126 28.6
PSO063G4397 Papaver somniferum HOM05D008880 ORTHO05D001544 1.6e-06 56.6 121 27.3
Sed0010021 Sechium edule HOM05D013798 ORTHO05D011235 1.6e-06 56.6 73 37.0
ECA248G3129 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 56.2 116 29.3
ECA238G1847 Erigeron canadensis HOM05D000002 ORTHO05D001544 3.6e-06 55.5 115 28.7
TWI48G0001 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 4.7e-06 55.1 121 28.9
PGR031G0989 Punica granatum HOM05D000002 ORTHO05D001544 6.1e-06 54.7 87 32.2
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-06 54.3 115 28.7


User provided reference genes

Program Settings