Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 9.6e-141 503.4 247 100.0
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 4.6e-135 484.6 247 97.2
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 2.1e-71 273.1 254 56.7
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 1.2e-61 240.7 246 54.9
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 2.0e-61 240.0 246 52.0
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 2.2e-60 236.5 240 54.6
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 7.1e-59 231.5 251 49.4
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 1.6e-58 230.3 257 51.8
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 1.6e-58 230.3 258 48.8
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 4.6e-58 228.8 258 51.2
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 5.1e-57 225.3 257 51.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 6.6e-57 224.9 238 52.1
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.5e-56 223.8 238 52.5
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 4.3e-56 222.2 238 52.1
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 2.8e-55 219.5 243 48.1
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 6.2e-55 218.4 253 46.2
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 1.1e-54 217.6 249 47.8
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.1e-54 217.6 253 46.2
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 6.8e-54 214.9 251 48.2
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 6.8e-54 214.9 256 50.4
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 8.9e-54 214.5 260 48.8
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.2e-53 214.2 259 46.7
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 4.4e-53 212.2 269 45.4
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 4.4e-53 212.2 245 49.4
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 2.9e-52 209.5 239 49.0
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 3.7e-52 209.1 274 43.1
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.4e-52 208.4 251 47.4
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.2e-51 206.1 246 48.4
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 5.4e-51 205.3 250 47.2
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 5.4e-51 205.3 258 44.6
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 5.4e-51 205.3 257 47.1
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 9.2e-51 204.5 248 45.6
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.2e-50 204.1 251 47.4
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 1.2e-50 204.1 252 43.7
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 2.7e-50 203.0 239 46.0
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 6.0e-50 201.8 259 46.3
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 7.8e-50 201.4 265 42.6
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 7.8e-50 201.4 242 48.3
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 1.3e-49 200.7 250 46.8
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.7e-49 200.3 250 46.8
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 3.0e-49 199.5 245 49.4
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 3.0e-49 199.5 245 43.3
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 5.6e-48 195.3 219 51.1
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 1.6e-47 193.7 271 39.5
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 2.1e-47 193.4 266 39.5
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 6.2e-47 191.8 245 45.3
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.2e-47 191.8 241 47.3
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 8.1e-47 191.4 209 53.6
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 1.1e-46 191.0 255 42.0
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 1.4e-46 190.7 263 43.0
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 1.4e-46 190.7 252 44.8
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 4.0e-46 189.1 252 44.8
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 5.2e-46 188.7 247 43.3
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 3.4e-45 186.0 247 42.9
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 4.4e-45 185.7 258 41.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.9e-45 184.5 228 47.4
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 2.9e-44 183.0 242 45.0
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 6.4e-44 181.8 250 41.2
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 3.2e-43 179.5 253 41.1
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.8e-42 174.9 230 45.2
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 2.3e-41 173.3 264 39.0
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.5e-40 170.6 261 40.2
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 1.9e-40 170.2 208 46.6
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 4.8e-39 165.6 258 40.3
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 2.2e-36 156.8 207 44.4
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 2.9e-36 156.4 184 47.3
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 9.3e-35 151.4 268 38.8
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 1.3e-33 147.5 169 50.3
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 9.6e-32 141.4 251 41.4
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 2.1e-31 140.2 250 35.2
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.1e-31 140.2 250 38.4
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 2.4e-30 136.7 225 38.2
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.4e-30 136.7 241 35.7
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 3.1e-30 136.3 185 44.9
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 1.5e-29 134.0 179 41.9
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 6.4e-28 128.6 250 35.6
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.4e-27 127.5 259 35.9
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 4.6e-26 122.5 243 35.8
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 6.0e-26 122.1 248 35.9
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 1.1e-24 117.9 244 35.7
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.5e-24 116.7 139 43.9
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 4.3e-24 115.9 246 33.7
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 4.3e-24 115.9 219 37.4
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 8.1e-23 111.7 259 32.8
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 3.1e-22 109.8 258 31.4
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.0e-21 107.1 138 42.0
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 8.4e-20 101.7 243 32.1
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 8.4e-20 101.7 174 37.9
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.1e-19 101.3 254 32.7
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.9e-19 100.5 240 32.5
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.5e-19 100.1 250 30.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.2e-19 99.8 247 32.4
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 3.2e-19 99.8 130 40.8
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 4.2e-19 99.4 243 31.3
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 5.5e-19 99.0 242 31.4
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 9.3e-19 98.2 261 31.0
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 9.3e-19 98.2 243 32.1
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 9.3e-19 98.2 243 31.7
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 9.3e-19 98.2 243 32.1
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 9.3e-19 98.2 243 31.7
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 9.3e-19 98.2 250 30.0
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 2.1e-18 97.1 243 30.5
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.1e-18 97.1 241 31.5
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 2.1e-18 97.1 243 30.5
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.1e-18 97.1 123 39.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 2.7e-18 96.7 255 32.2
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.7e-18 96.7 249 29.7
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 3.5e-18 96.3 115 50.4
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.5e-18 96.3 243 31.7
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.5e-18 96.3 165 41.8
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 4.6e-18 95.9 243 30.9
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 4.6e-18 95.9 156 44.2
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 4.6e-18 95.9 252 31.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.0e-17 94.7 239 32.2
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 1.0e-17 94.7 243 31.3
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 1.3e-17 94.4 166 41.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.8e-17 94.0 242 32.2
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.1e-16 91.3 97 52.6
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 4.3e-16 89.4 251 29.1
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 5.7e-16 89.0 220 27.7
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 5.7e-16 89.0 94 50.0
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.5e-13 80.9 80 48.8
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.5e-13 80.9 79 51.9
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 1.9e-11 73.9 166 33.1
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.6e-10 70.9 91 42.9
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.5e-10 69.7 78 44.9
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.6e-10 69.3 98 39.8
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 7.9e-10 68.6 77 42.9
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 4.3e-08 62.8 70 44.3
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 1.4e-06 57.8 293 23.9


User provided reference genes

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