Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 4.1e-48 194.5 105 100.0
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 5.9e-47 190.7 103 99.0
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 7.5e-26 120.6 101 69.3
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 2.2e-25 119.0 96 68.8
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 3.7e-25 118.2 96 68.8
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 6.3e-25 117.5 96 68.8
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 8.2e-25 117.1 96 66.7
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 5.3e-24 114.4 96 67.7
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 9.1e-24 113.6 100 67.0
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 3.5e-23 111.7 97 67.0
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 2.2e-22 109.0 102 62.7
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 2.2e-22 109.0 83 72.3
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 2.9e-22 108.6 112 58.0
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 5.0e-22 107.8 83 71.1
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 6.5e-22 107.5 102 61.8
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 8.5e-22 107.1 96 65.6
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.5e-21 106.3 83 69.9
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 2.5e-21 105.5 96 61.5
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 2.5e-21 105.5 83 69.9
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 7.2e-21 104.0 83 69.9
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 7.2e-21 104.0 96 60.4
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 1.6e-20 102.8 106 60.4
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 1.6e-20 102.8 104 57.7
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 1.6e-20 102.8 91 67.0
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 2.1e-20 102.4 96 61.5
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 2.1e-20 102.4 104 58.7
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 2.1e-20 102.4 104 60.6
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 3.6e-20 101.7 104 57.7
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 3.6e-20 101.7 103 59.2
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 8.0e-20 100.5 83 66.3
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 1.2e-18 96.7 97 57.7
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.0e-18 95.9 95 56.8
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.0e-18 95.9 95 56.8
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 3.4e-18 95.1 95 58.9
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 4.4e-18 94.7 93 58.1
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 7.5e-18 94.0 98 57.1
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 9.8e-18 93.6 94 58.5
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 9.8e-18 93.6 96 56.2
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 9.8e-18 93.6 96 56.2
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 2.8e-17 92.0 91 60.4
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 4.8e-17 91.3 119 47.9
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 6.3e-17 90.9 100 55.0
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 6.3e-17 90.9 97 55.7
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 1.4e-16 89.7 137 43.8
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 1.8e-16 89.4 91 54.9
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 1.8e-16 89.4 87 56.3
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 2.4e-16 89.0 95 54.7
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 4.1e-16 88.2 91 58.2
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 5.4e-16 87.8 98 54.1
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 7.0e-16 87.4 96 55.2
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 9.1e-16 87.0 88 56.8
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 9.1e-16 87.0 88 56.8
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 9.1e-16 87.0 88 56.8
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 9.1e-16 87.0 96 55.2
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 9.1e-16 87.0 98 54.1
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 1.2e-15 86.7 99 52.5
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 1.2e-15 86.7 98 55.1
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 1.6e-15 86.3 96 54.2
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 1.6e-15 86.3 98 54.1
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 1.6e-15 86.3 78 62.8
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 2.0e-15 85.9 96 54.2
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 2.0e-15 85.9 83 60.2
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 2.7e-15 85.5 88 55.7
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 3.5e-15 85.1 88 54.5
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 3.5e-15 85.1 88 55.7
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 3.5e-15 85.1 88 55.7
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 7.7e-15 84.0 78 60.3
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.0e-14 83.6 99 53.5
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 3.8e-14 81.6 93 53.8
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 5.0e-14 81.3 88 51.1
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 5.0e-14 81.3 98 46.9
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 6.5e-14 80.9 124 44.4
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 6.5e-14 80.9 88 53.4
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 6.5e-14 80.9 101 49.5
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 8.5e-14 80.5 124 44.4
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 1.1e-13 80.1 93 49.5
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 1.9e-13 79.3 101 48.5
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 5.5e-13 77.8 101 48.5
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 1.2e-12 76.6 86 51.2
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 1.2e-12 76.6 100 50.0
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 6.1e-12 74.3 88 51.1
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 6.1e-12 74.3 91 46.2
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 1.4e-11 73.2 62 66.1
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 2.3e-11 72.4 97 49.5
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 1.5e-10 69.7 98 45.9
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 1.3e-09 66.6 97 45.4
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 2.8e-09 65.5 82 47.6
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 3.7e-09 65.1 82 47.6
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 1.1e-08 63.5 93 44.1
Nitab4.5_0001618g0280 Nicotiana tabacum HOM05D007492 ORTHO05D009510 3.1e-08 62.0 75 50.7
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 9.2e-08 60.5 88 47.7
Thhalv10006333m.g Eutrema salsugineum HOM05D007492 ORTHO05D009510 1.6e-07 59.7 62 54.8
AT3G57320 Arabidopsis thaliana HOM05D007492 ORTHO05D009510 4.5e-07 58.2 75 46.7
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 1.3e-06 56.6 99 41.4
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 2.9e-06 55.5 71 43.7
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 3.8e-06 55.1 96 39.6
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 5.0e-06 54.7 72 41.7


User provided reference genes

Program Settings