Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 9.6e-209 729.9 376 100.0
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 9.6e-209 729.9 376 100.0
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 3.6e-139 498.8 364 67.9
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 9.2e-135 484.2 367 67.0
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.3e-133 480.3 364 65.1
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.7e-133 479.9 366 66.1
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.0e-133 478.4 366 65.8
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 6.6e-133 478.0 366 65.8
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.1e-131 473.0 366 65.0
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 2.8e-131 472.6 367 65.9
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.5e-129 464.5 363 64.5
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.3e-128 463.8 363 64.2
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.9e-128 462.6 372 64.2
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.9e-127 459.9 367 61.0
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 3.2e-127 459.1 366 62.8
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 4.1e-127 458.8 370 64.3
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 7.1e-127 458.0 368 62.8
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 9.2e-127 457.6 366 61.5
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 7.8e-126 454.5 380 58.9
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 1.0e-125 454.1 370 64.1
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 3.9e-125 452.2 369 61.2
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 5.1e-125 451.8 365 60.8
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 3.6e-123 445.7 364 60.4
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 3.6e-123 445.7 367 62.7
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 1.1e-122 444.1 370 62.2
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 2.6e-121 439.5 375 60.8
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 5.8e-121 438.3 369 61.2
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 7.6e-121 438.0 364 58.2
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 6.4e-120 434.9 367 61.6
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 3.2e-119 432.6 370 60.8
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.1e-119 432.2 364 58.5
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.1e-119 432.2 364 58.2
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 5.4e-119 431.8 367 59.7
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 9.2e-119 431.0 364 58.2
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 2.1e-118 429.9 366 58.5
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 1.0e-117 427.6 368 59.0
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.3e-117 427.2 364 57.4
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 8.6e-117 424.5 364 57.4
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.9e-116 423.3 370 60.5
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 3.3e-116 422.5 369 57.5
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 3.3e-116 422.5 367 58.3
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 4.3e-116 422.2 368 58.7
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 9.6e-116 421.0 385 56.4
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 1.2e-115 420.6 364 56.6
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 1.2e-115 420.6 367 58.0
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 4.7e-115 418.7 365 56.2
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 6.2e-115 418.3 372 57.0
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 6.2e-115 418.3 367 56.7
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 8.1e-115 417.9 366 60.7
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 1.1e-114 417.5 370 59.7
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.1e-114 417.5 374 58.6
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 2.4e-114 416.4 367 57.5
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.4e-114 416.4 379 54.9
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 4.0e-114 415.6 316 66.1
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 4.0e-114 415.6 367 57.8
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 5.2e-114 415.2 375 57.1
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 5.8e-113 411.8 367 59.7
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 4.9e-112 408.7 368 57.6
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 6.4e-112 408.3 366 57.1
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 6.4e-112 408.3 367 57.2
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 6.4e-112 408.3 367 55.9
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.1e-111 407.5 372 57.3
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 4.2e-111 405.6 366 57.4
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 1.2e-110 404.1 367 55.6
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 3.5e-110 402.5 366 56.3
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.0e-109 401.0 367 56.7
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.7e-109 400.2 369 56.6
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 2.3e-109 399.8 333 60.1
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 3.9e-109 399.1 365 56.2
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 3.9e-109 399.1 365 56.7
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 4.3e-108 395.6 390 51.0
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 9.6e-108 394.4 408 51.2
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 1.3e-107 394.0 367 55.3
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 8.1e-107 391.3 367 55.3
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 1.4e-106 390.6 406 52.5
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 3.1e-106 389.4 367 54.2
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 4.0e-106 389.0 367 54.8
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.2e-105 387.5 367 55.0
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.4e-105 386.0 366 56.3
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 5.8e-105 385.2 366 55.2
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 5.8e-105 385.2 368 54.6
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 7.6e-105 384.8 366 56.6
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 9.9e-105 384.4 376 54.5
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.2e-103 379.4 382 53.1
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 7.1e-103 378.3 368 54.1
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 7.1e-103 378.3 367 53.4
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 9.3e-103 377.9 355 55.8
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 2.1e-102 376.7 365 53.2
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.7e-102 376.3 314 60.5
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 2.7e-102 376.3 485 45.4
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 2.7e-102 376.3 312 61.5
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 3.5e-102 375.9 369 52.6
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 3.5e-102 375.9 367 50.4
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 4.6e-102 375.6 366 54.6
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 3.0e-101 372.9 366 56.3
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.9e-101 372.5 367 54.0
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.5e-100 370.5 366 54.1
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 2.5e-100 369.8 370 54.1
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 3.3e-100 369.4 368 53.0
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 5.6e-100 368.6 369 53.7
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.6e-99 367.1 368 52.7
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.8e-99 366.3 351 54.4
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 3.6e-99 365.9 380 51.8
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 4.8e-99 365.5 286 64.7
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 6.2e-99 365.2 284 63.0
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.4e-98 364.0 370 53.5
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 1.4e-98 364.0 507 42.4
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 5.3e-98 362.1 373 52.5
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 5.3e-98 362.1 371 52.6
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 2.0e-97 360.1 380 52.6
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 3.4e-97 359.4 365 53.2
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 1.3e-96 357.5 370 52.4
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 1.7e-96 357.1 405 47.9
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 6.4e-96 355.1 371 52.8
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 1.9e-95 353.6 401 48.1
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 5.5e-95 352.1 370 52.4
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 9.3e-95 351.3 369 52.0
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.2e-94 350.9 371 52.3
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 7.9e-94 348.2 312 58.7
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 9.6e-92 341.3 371 51.2
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 9.6e-92 341.3 309 57.6
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 1.6e-91 340.5 355 52.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.1e-90 337.8 563 39.4
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 1.1e-90 337.8 376 47.1
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 3.4e-89 332.8 311 56.6
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 4.5e-89 332.4 475 39.2
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.0e-88 331.3 371 46.9
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 1.0e-85 321.2 370 47.0
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 1.8e-85 320.5 311 54.3
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.2e-75 287.0 217 67.7
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-74 284.6 315 50.8
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 1.3e-72 277.7 209 65.6
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.3e-69 266.9 312 49.7
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 3.9e-69 266.2 311 47.9
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 5.1e-69 265.8 213 63.8
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 1.5e-68 264.2 209 62.7
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 2.5e-68 263.5 208 63.0
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 2.2e-64 250.4 314 41.1
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-62 244.6 200 60.0
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-62 244.6 200 60.0
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.0e-61 240.0 165 71.5
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 2.0e-60 237.3 383 36.0
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 9.7e-60 235.0 167 71.3
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.3e-59 234.6 163 71.8
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.7e-59 234.2 167 71.3
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.2e-59 233.8 167 70.7
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 1.1e-58 231.5 199 56.8
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.1e-58 229.6 167 70.1
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 7.0e-58 228.8 346 38.7
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 2.2e-56 223.8 161 67.7
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.0e-53 214.9 377 35.5
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 8.8e-53 211.8 167 66.5
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.5e-52 208.8 189 62.4
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 1.7e-51 207.6 371 32.9
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.7e-51 207.6 376 35.6
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.4e-50 204.5 155 65.2
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 2.4e-50 203.8 381 35.2
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 2.4e-50 203.8 285 43.5
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.1e-50 203.4 379 34.6
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 4.7e-46 189.5 371 34.0
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 4.4e-44 183.0 200 45.0
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.7e-41 173.7 128 68.0
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 7.7e-41 172.2 156 48.7
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.3e-40 171.4 259 40.9
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 6.5e-40 169.1 156 48.1
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.2e-39 165.6 110 74.5
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 7.2e-39 165.6 124 63.7
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.4e-39 165.2 152 59.2
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.0e-37 161.8 161 52.2
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.3e-31 139.8 132 47.0
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 1.4e-29 134.8 136 49.3
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 1.3e-27 128.3 139 48.9
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 6.4e-27 125.9 136 47.8
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 7.0e-26 122.5 170 40.6
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 5.6e-23 112.8 314 29.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 4.0e-21 106.7 251 29.5
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 1.7e-08 64.7 382 22.8


User provided reference genes

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