Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 0.0e+00 1123.6 574 100.0
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.2e-229 800.0 560 73.8
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 8.3e-228 793.9 560 73.6
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 1.1e-227 793.5 561 73.6
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.4e-227 793.1 562 74.0
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 7.0e-227 790.8 560 73.0
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 7.7e-226 787.3 559 73.2
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.0e-225 784.6 579 71.3
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 4.7e-223 778.1 564 70.0
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 4.0e-222 775.0 564 70.2
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 5.7e-221 771.2 564 70.0
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 9.8e-221 770.4 557 72.0
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.7e-220 769.6 581 70.7
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 1.4e-219 766.5 560 72.0
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.8e-219 766.1 565 71.7
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 5.4e-219 764.6 560 70.7
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 1.2e-218 763.5 562 72.2
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 1.2e-218 763.5 560 69.8
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 2.7e-218 762.3 560 70.0
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.7e-218 762.3 565 71.0
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 5.9e-218 761.1 564 69.3
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 7.8e-218 760.8 558 69.7
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 1.7e-217 759.6 558 70.3
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 1.7e-217 759.6 558 70.3
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.7e-217 759.6 564 68.6
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.9e-217 758.4 564 69.0
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 3.9e-217 758.4 560 69.5
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.9e-216 756.1 571 70.6
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 1.9e-216 756.1 563 68.6
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 3.3e-216 755.4 554 70.9
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 7.3e-216 754.2 555 69.7
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 4.7e-215 751.5 558 70.8
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.4e-214 750.0 560 68.9
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 3.1e-214 748.8 560 68.8
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 3.1e-214 748.8 558 69.2
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 5.2e-214 748.0 560 70.0
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 5.8e-213 744.6 580 67.8
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 9.8e-213 743.8 542 72.3
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 9.8e-213 743.8 558 70.1
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 3.7e-212 741.9 558 68.5
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 6.4e-212 741.1 562 69.6
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.4e-211 739.2 596 66.1
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 3.2e-211 738.8 558 69.2
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.6e-210 736.5 559 68.9
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 2.7e-210 735.7 555 69.0
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 2.7e-210 735.7 564 67.6
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 2.7e-210 735.7 558 68.5
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 2.7e-210 735.7 571 68.3
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 3.5e-210 735.3 560 68.9
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.0e-209 733.8 568 69.4
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 1.0e-209 733.8 560 68.6
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 2.3e-209 732.6 560 68.9
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 5.0e-209 731.5 558 67.0
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 1.9e-208 729.6 560 68.4
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 1.9e-208 729.6 560 67.5
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 2.1e-207 726.1 564 67.6
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 4.7e-207 724.9 558 68.5
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 6.2e-207 724.5 560 67.9
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 6.2e-207 724.5 560 67.9
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.1e-206 723.8 582 67.2
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 8.9e-206 720.7 560 67.9
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 8.9e-206 720.7 560 68.4
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.5e-205 719.9 587 65.4
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 2.6e-205 719.2 560 68.0
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 9.8e-205 717.2 559 67.6
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 1.3e-204 716.8 581 65.1
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.7e-202 709.1 540 69.4
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 3.5e-202 708.8 560 65.2
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 4.6e-202 708.4 556 68.2
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 6.0e-202 708.0 556 68.0
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.7e-201 706.4 559 64.9
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 6.6e-201 704.5 510 70.4
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 6.6e-201 704.5 559 65.7
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 2.5e-200 702.6 564 64.2
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 5.6e-200 701.4 564 64.7
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 1.6e-199 699.9 589 63.5
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 2.3e-198 696.0 560 63.8
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 3.1e-198 695.7 560 64.3
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 3.1e-198 695.7 560 66.1
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 3.1e-198 695.7 559 64.6
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 5.2e-198 694.9 557 64.8
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 1.5e-197 693.3 575 63.5
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.6e-197 692.6 559 65.5
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 3.4e-197 692.2 558 63.6
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 4.4e-197 691.8 572 66.1
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.1e-195 687.2 560 65.0
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 1.9e-195 686.4 564 63.1
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.4e-195 686.0 558 63.3
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 5.4e-195 684.9 565 64.2
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 5.4e-195 684.9 539 67.2
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 7.1e-195 684.5 518 69.5
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 3.5e-194 682.2 572 61.7
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 1.0e-193 680.6 555 62.5
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 6.6e-193 677.9 564 62.6
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.5e-192 676.8 561 64.2
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 5.6e-192 674.9 496 71.2
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 1.6e-191 673.3 554 63.4
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 4.7e-191 671.8 556 62.6
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 8.1e-191 671.0 562 63.9
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 4.0e-190 668.7 556 62.6
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 3.8e-188 662.1 554 63.0
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 4.2e-187 658.7 558 61.8
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 4.2e-187 658.7 558 61.8
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 4.6e-186 655.2 495 68.5
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 5.3e-182 641.7 498 68.3
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.8e-177 626.7 557 60.0
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 2.5e-176 622.9 552 58.2
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 7.4e-176 621.3 542 61.1
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 2.0e-173 613.2 497 64.2
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 4.5e-173 612.1 538 57.6
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 4.3e-168 595.5 553 58.6
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 8.1e-167 591.3 412 73.5
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 2.1e-159 566.6 576 54.3
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 5.9e-157 558.5 502 61.8
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 6.3e-151 538.5 556 54.3
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 1.1e-150 537.7 563 52.2
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 1.4e-150 537.3 441 63.5
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 3.0e-145 519.6 570 50.2
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 6.7e-145 518.5 361 75.3
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 7.4e-144 515.0 399 68.4
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 2.2e-140 503.4 551 52.3
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 7.0e-134 481.9 407 61.2
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 3.5e-133 479.6 477 56.2
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 3.2e-123 446.4 407 60.4
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 1.2e-114 417.9 523 48.0
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 6.8e-113 412.1 294 71.8
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 5.6e-107 392.5 563 44.4
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 5.2e-105 386.0 583 41.2
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.6e-98 364.4 541 43.1
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.1e-94 351.7 282 65.6
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 6.9e-73 279.3 200 70.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 9.9e-64 248.8 489 36.6
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 4.3e-59 233.4 377 44.0
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 1.3e-52 211.8 280 45.4
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 3.1e-41 174.1 142 65.5
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 3.8e-39 167.2 144 54.9
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 5.5e-38 163.3 132 65.9
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 2.1e-37 161.4 189 50.8
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 1.5e-35 155.2 111 64.0
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.3e-34 152.1 258 40.3
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 6.9e-33 146.4 108 62.0
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 1.9e-30 138.3 100 65.0
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 5.1e-28 130.2 88 72.7
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 4.8e-26 123.6 187 41.2
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 9.7e-19 99.4 76 64.5
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.7e-18 98.6 84 59.5
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 4.1e-17 94.0 84 54.8
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 5.3e-17 93.6 201 37.8
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 2.6e-16 91.3 85 57.6
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 6.7e-12 76.6 68 54.4


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