Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 9.2e-251 869.8 445 100.0
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 2.7e-157 559.3 435 67.6
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.5e-157 558.9 447 66.4
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.1e-155 553.9 410 68.8
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 5.5e-155 551.6 436 65.4
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.1e-154 549.7 445 64.0
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.7e-154 548.5 412 68.4
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.7e-154 548.5 412 68.4
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.0e-154 547.7 412 68.7
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 3.4e-152 542.3 445 63.1
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.2e-151 539.7 450 63.3
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.8e-151 539.3 412 67.5
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.3e-151 538.1 420 67.1
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.8e-150 536.6 404 67.8
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 3.1e-150 535.8 450 63.6
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 3.5e-149 532.3 447 63.5
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.7e-148 530.0 439 65.1
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 5.0e-148 528.5 451 63.2
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.4e-145 520.4 414 65.9
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 5.2e-145 518.5 450 62.4
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 2.6e-144 516.2 398 64.6
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.6e-144 516.2 445 62.0
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.2e-143 513.1 445 62.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.4e-142 510.4 447 61.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.7e-141 506.1 447 60.6
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.8e-141 504.6 433 61.0
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.3e-140 503.8 422 62.8
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 3.9e-140 502.3 403 64.3
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 6.6e-140 501.5 404 63.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 8.6e-140 501.1 384 63.8
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.1e-139 500.7 382 63.9
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.1e-139 500.7 422 62.1
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 2.5e-139 499.6 407 63.6
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.3e-139 499.2 457 58.6
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.6e-138 496.9 441 60.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.8e-137 493.4 429 61.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 6.8e-137 491.5 399 63.4
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 2.0e-136 490.0 426 58.7
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 9.8e-136 487.6 411 60.8
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 3.2e-134 482.6 401 63.6
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.5e-133 479.2 413 58.8
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.6e-133 478.8 390 63.8
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.3e-132 477.2 398 61.6
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.9e-131 473.4 409 62.6
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.5e-131 473.0 347 66.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 4.3e-131 472.2 409 62.6
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-130 470.7 376 63.6
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.6e-130 470.3 409 58.7
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 4.7e-130 468.8 438 58.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 6.2e-130 468.4 394 60.9
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 8.1e-130 468.0 442 56.6
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 2.3e-129 466.5 437 58.4
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.5e-128 463.8 437 58.4
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 9.9e-128 461.1 383 63.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 2.2e-127 459.9 400 60.5
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.1e-126 457.6 381 58.8
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.2e-126 456.1 420 58.1
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 7.1e-126 454.9 403 57.6
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.6e-125 453.8 402 60.2
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.7e-125 453.0 378 61.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 2.9e-119 433.0 436 53.2
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.6e-117 427.2 440 51.8
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 2.1e-117 426.8 438 52.1
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 4.6e-117 425.6 400 53.8
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 7.8e-117 424.9 400 54.0
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.3e-116 424.1 444 50.7
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.3e-116 423.3 429 51.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 5.1e-116 422.2 400 54.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 5.1e-116 422.2 400 54.0
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.6e-114 417.2 434 51.6
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.1e-114 416.8 434 51.4
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.8e-114 416.4 408 55.1
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.6e-114 416.0 385 55.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.6e-112 408.3 386 52.6
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.3e-111 407.5 364 60.4
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.1e-109 400.2 346 61.3
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.7e-108 397.1 338 59.2
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 8.4e-103 378.3 427 48.5
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.4e-102 376.7 427 48.7
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 6.7e-100 368.6 291 64.9
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.9e-95 352.4 322 55.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 4.2e-94 349.4 298 59.1
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.1e-90 337.0 393 45.8
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 6.1e-85 318.9 377 45.9
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.5e-83 313.5 326 54.3
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.1e-81 306.6 359 45.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.4e-80 303.1 392 40.1
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.5e-78 297.0 413 41.6
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 2.5e-70 270.4 302 47.4
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 3.6e-69 266.5 314 46.5
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.9e-69 265.4 258 58.5
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 8.5e-63 245.4 403 36.2
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.6e-56 224.6 374 38.8
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 5.9e-56 222.6 602 28.2
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 8.0e-53 212.2 221 52.5
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 3.7e-42 176.8 248 40.7
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 4.1e-41 173.3 116 71.6
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.2e-32 145.2 132 50.8
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.6e-32 144.8 186 46.8
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 2.9e-26 124.0 134 50.7
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 2.0e-24 117.9 99 61.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 6.0e-24 116.3 391 27.1
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.5e-22 110.9 84 69.0
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.3e-20 104.4 84 59.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.2e-19 102.1 86 60.5
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.5e-19 101.7 78 64.1
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 8.3e-18 95.9 84 52.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 4.3e-14 83.6 81 55.6
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.1e-13 81.3 65 67.7
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.8e-12 76.3 54 70.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 9.2e-09 65.9 37 78.4
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 1.2e-08 65.5 64 50.0


User provided reference genes

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