Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 2.2e-42 175.3 89 100.0
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 1.8e-28 129.0 89 75.3
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.2e-27 126.3 89 73.0
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.2e-27 126.3 89 73.0
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 5.7e-27 124.0 89 71.9
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 7.5e-27 123.6 88 71.6
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 9.7e-27 123.2 88 71.6
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 2.2e-26 122.1 86 74.4
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 2.2e-26 122.1 89 70.8
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 69.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 4.8e-26 120.9 89 68.5
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 4.8e-26 120.9 89 68.5
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.8e-26 120.9 89 70.8
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 6.3e-26 120.6 89 70.8
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 6.3e-26 120.6 89 68.5
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 8.3e-26 120.2 89 69.7
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.3e-26 120.2 89 68.5
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.3e-26 120.2 89 68.5
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 8.3e-26 120.2 89 68.5
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.1e-25 119.8 84 73.8
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.4e-25 119.4 88 70.5
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.4e-25 119.4 89 68.5
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 1.4e-25 119.4 89 66.3
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.4e-25 119.4 78 74.4
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-25 119.0 89 69.7
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-25 119.0 89 69.7
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.8e-25 119.0 89 66.3
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 2.4e-25 118.6 87 71.3
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 3.1e-25 118.2 89 68.5
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.1e-25 118.2 88 69.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 4.1e-25 117.9 88 69.3
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 4.1e-25 117.9 89 68.5
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 5.3e-25 117.5 88 67.0
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 5.3e-25 117.5 77 76.6
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 7.0e-25 117.1 89 68.5
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 9.1e-25 116.7 89 68.5
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 9.1e-25 116.7 89 70.8
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.2e-24 116.3 77 77.9
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.2e-24 116.3 88 65.9
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 2.7e-24 115.2 77 76.6
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 2.7e-24 115.2 88 65.9
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 3.5e-24 114.8 89 66.3
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 5.9e-24 114.0 79 68.4
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 5.9e-24 114.0 79 68.4
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 5.9e-24 114.0 87 63.2
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 7.7e-24 113.6 88 69.3
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 7.7e-24 113.6 89 65.2
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 7.7e-24 113.6 89 66.3
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.0e-23 113.2 89 66.3
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.3e-23 112.8 88 64.8
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.3e-23 112.8 103 61.2
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 1.3e-23 112.8 89 65.2
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.7e-23 112.5 81 71.6
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.2e-23 112.1 88 69.3
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 2.2e-23 112.1 88 68.2
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 2.2e-23 112.1 88 68.2
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 3.8e-23 111.3 77 71.4
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 3.8e-23 111.3 89 68.5
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 3.8e-23 111.3 88 68.2
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 3.8e-23 111.3 89 64.0
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 8.5e-23 110.2 87 67.8
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 8.5e-23 110.2 87 67.8
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 8.5e-23 110.2 87 67.8
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 8.5e-23 110.2 89 68.5
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 8.5e-23 110.2 88 70.5
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 8.5e-23 110.2 79 68.4
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.1e-22 109.8 89 64.0
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.5e-22 109.4 88 67.0
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.5e-22 109.4 88 67.0
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.9e-22 109.0 88 67.0
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 2.5e-22 108.6 87 66.7
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 2.5e-22 108.6 88 69.3
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 3.2e-22 108.2 87 66.7
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 3.2e-22 108.2 87 66.7
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 4.2e-22 107.8 79 68.4
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 5.5e-22 107.5 89 62.9
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 5.5e-22 107.5 87 64.4
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 7.2e-22 107.1 88 69.3
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 7.2e-22 107.1 86 61.6
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 9.4e-22 106.7 87 66.7
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-21 106.3 87 63.2
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.2e-21 106.3 90 64.4
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 1.2e-21 106.3 89 62.9
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 2.7e-21 105.1 89 60.7
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.7e-21 105.1 126 51.6
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 2.7e-21 105.1 90 63.3
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 2.0e-19 99.0 89 58.4
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 3.4e-19 98.2 87 58.6
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 3.4e-19 98.2 124 47.6
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 5.7e-19 97.4 79 64.6
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 7.5e-19 97.1 115 53.0
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 7.0e-17 90.5 78 64.1
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 3.5e-16 88.2 77 67.5
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 2.3e-15 85.5 148 39.2
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 2.3e-15 85.5 148 39.2
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 2.5e-14 82.0 197 33.0
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 9.5e-14 80.1 81 55.6
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.1e-13 79.0 87 51.7
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 2.1e-13 79.0 60 70.0
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 3.6e-13 78.2 59 62.7
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 1.4e-12 76.3 79 50.6
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.5e-11 72.8 48 70.8
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 9.8e-11 70.1 66 54.5
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.2e-10 68.9 63 58.7
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 8.3e-10 67.0 48 68.8
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 8.3e-10 67.0 48 66.7
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 1.8e-09 65.9 48 66.7
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 4.1e-09 64.7 49 65.3
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 8.6e-07 57.0 42 69.0
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 4.3e-06 54.7 48 62.5


User provided reference genes

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