Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 6.1e-95 350.9 188 100.0
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 9.6e-24 114.4 199 44.7
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 3.6e-23 112.5 195 41.0
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 8.1e-23 111.3 194 41.2
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 6.4e-20 101.7 186 39.2
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.5e-18 95.9 161 41.0
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 4.6e-18 95.5 196 37.8
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 1.3e-17 94.0 197 38.1
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 3.9e-17 92.4 199 36.7
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 6.6e-17 91.7 181 36.5
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 4.3e-16 89.0 176 36.9
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.6e-15 87.0 190 38.4
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 2.1e-15 86.7 194 39.2
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 2.8e-15 86.3 192 39.6
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 5.3e-14 82.0 187 34.2
FAN18G2983 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.4e-13 79.3 158 38.0
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 5.8e-13 78.6 156 39.7
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 9.9e-13 77.8 196 36.7
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 1.3e-12 77.4 184 34.8
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 1.7e-12 77.0 196 35.2
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 2.2e-12 76.6 173 38.7
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 2.9e-12 76.3 188 34.6
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 2.9e-12 76.3 179 35.8
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 3.8e-12 75.9 180 38.9
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 3.8e-12 75.9 179 35.8
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 4.9e-12 75.5 183 36.1
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 4.9e-12 75.5 179 35.8
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 6.4e-12 75.1 152 41.4
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.1e-11 74.3 190 33.2
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 1.9e-11 73.6 178 36.5
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 1.9e-11 73.6 150 42.0
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 3.2e-11 72.8 193 34.2
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 3.2e-11 72.8 161 38.5
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 2.7e-10 69.7 154 36.4
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 3.5e-10 69.3 154 39.0
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 3.5e-10 69.3 148 38.5
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 4.6e-10 68.9 154 39.0
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 1.0e-09 67.8 153 37.9
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 1.0e-09 67.8 164 39.0
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 1.3e-09 67.4 152 32.9
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 1.8e-09 67.0 154 35.7
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 3.9e-09 65.9 162 34.6
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 6.7e-09 65.1 180 33.3
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 6.7e-09 65.1 152 36.2
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 6.7e-09 65.1 164 34.1
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 8.7e-09 64.7 168 36.9
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 1.1e-08 64.3 174 35.6
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 1.1e-08 64.3 157 31.8
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 1.5e-08 63.9 160 35.6
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 2.5e-08 63.2 152 36.2
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 2.5e-08 63.2 175 31.4
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 5.6e-08 62.0 138 38.4
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 5.6e-08 62.0 161 38.5
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 7.4e-08 61.6 143 32.9
Nn4g22451 Nelumbo nucifera HOM05D008121 ORTHO05D009878 7.4e-08 61.6 62 54.8
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 1.6e-07 60.5 80 50.0
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 1.6e-07 60.5 153 32.7
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 2.8e-07 59.7 161 31.1
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 4.8e-07 58.9 80 48.8
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 6.2e-07 58.5 170 32.4
PGR044G1447 Punica granatum HOM05D011481 ORTHO05D009878 1.4e-06 57.4 163 31.9
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 1.8e-06 57.0 140 38.6
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 1.8e-06 57.0 178 30.9
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.8e-06 57.0 56 57.1
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.8e-06 57.0 56 57.1
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 1.8e-06 57.0 121 40.5
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 2.4e-06 56.6 166 33.1
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 3.1e-06 56.2 136 30.9
Glyma.05G045100 Glycine max HOM05D008121 ORTHO05D009878 3.1e-06 56.2 158 32.9
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 5.3e-06 55.5 184 31.5


User provided reference genes

Program Settings