Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 5.1e-108 394.4 200 100.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.1e-85 317.8 200 79.5
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.3e-84 315.8 201 78.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.0e-84 315.5 200 78.5
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 3.0e-84 315.5 200 78.5
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 3.0e-84 315.5 201 78.1
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 5.1e-84 314.7 202 77.2
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 6.7e-84 314.3 203 78.3
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.5e-83 312.4 197 76.6
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.4e-83 310.8 198 79.3
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 7.4e-83 310.8 200 77.0
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 7.4e-83 310.8 200 78.0
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 9.7e-83 310.5 198 77.8
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 9.7e-83 310.5 198 78.3
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.3e-82 310.1 198 79.3
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.3e-82 310.1 198 79.3
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.3e-82 310.1 198 79.3
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 3.7e-82 308.5 200 76.5
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 3.7e-82 308.5 196 80.6
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 6.3e-82 307.8 202 77.2
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 6.3e-82 307.8 198 78.8
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.8e-81 306.2 204 76.0
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 4.1e-81 305.1 203 75.4
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 4.1e-81 305.1 194 76.3
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 5.3e-81 304.7 197 77.2
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 6.9e-81 304.3 202 74.8
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 9.1e-81 303.9 204 75.5
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 2.0e-80 302.8 199 75.9
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.6e-80 302.4 190 79.5
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 3.4e-80 302.0 202 74.8
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 3.4e-80 302.0 199 75.9
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 4.5e-80 301.6 198 75.8
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 5.9e-80 301.2 200 74.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 7.7e-80 300.8 204 75.0
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.0e-79 300.4 201 75.6
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 1.3e-79 300.1 200 74.0
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.3e-79 300.1 186 78.5
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 1.3e-79 300.1 200 75.0
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.7e-79 299.7 194 76.3
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 2.2e-79 299.3 184 79.3
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 2.9e-79 298.9 195 75.9
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.9e-79 298.9 184 78.3
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.8e-79 298.5 197 74.6
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 6.5e-79 297.7 197 76.1
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 8.5e-79 297.4 200 75.0
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 8.5e-79 297.4 197 74.6
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 8.5e-79 297.4 190 78.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 8.5e-79 297.4 200 74.5
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.1e-78 297.0 201 74.1
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.9e-78 296.2 186 79.0
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.9e-78 296.2 195 73.3
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 1.9e-78 296.2 201 73.6
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 2.5e-78 295.8 201 73.1
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.2e-78 295.4 200 75.5
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 3.2e-78 295.4 201 74.6
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 4.2e-78 295.0 201 73.1
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.2e-78 295.0 197 74.6
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.2e-78 295.0 197 74.6
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 4.2e-78 295.0 198 74.7
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.2e-78 295.0 201 73.1
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.1e-77 292.7 198 74.2
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 4.6e-77 291.6 194 72.2
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.4e-76 290.0 195 72.8
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.4e-76 290.0 219 70.8
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 3.9e-76 288.5 199 73.9
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 5.1e-76 288.1 189 74.1
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 5.1e-76 288.1 205 71.7
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 5.1e-76 288.1 198 72.7
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 6.7e-76 287.7 199 73.9
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 6.7e-76 287.7 198 72.7
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 6.7e-76 287.7 198 72.7
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 6.7e-76 287.7 198 72.7
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.1e-75 287.0 196 73.0
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.1e-75 287.0 198 72.2
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 2.0e-75 286.2 198 73.2
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 2.0e-75 286.2 187 77.5
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 2.0e-75 286.2 199 72.4
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 3.3e-75 285.4 200 73.0
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 3.3e-75 285.4 199 68.8
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 4.4e-75 285.0 196 72.4
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 5.7e-75 284.6 191 73.3
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 5.7e-75 284.6 198 72.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 9.7e-75 283.9 195 72.3
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 4.8e-74 281.6 196 74.0
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.1e-73 278.5 197 72.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 1.5e-72 276.6 198 69.2
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-72 275.8 186 74.7
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 3.8e-71 271.9 225 64.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.0e-71 271.6 186 72.0
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.1e-70 270.4 225 63.1
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 3.2e-70 268.9 202 66.8
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 2.1e-69 266.2 199 69.3
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.6e-69 265.4 200 69.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 2.3e-68 262.7 199 67.8
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 6.7e-68 261.2 167 77.2
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 5.3e-65 251.5 240 57.5
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.3e-63 246.9 311 47.3
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 1.7e-63 246.5 165 75.8
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 8.5e-63 244.2 154 78.6
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.5e-59 233.4 153 75.8
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.0e-59 233.0 194 61.3
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.1e-53 213.0 132 78.0
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 6.3e-50 201.4 116 85.3
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.1e-49 198.7 134 73.9
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.5e-48 195.7 125 76.0
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.5e-48 195.3 133 70.7
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 4.2e-46 188.7 106 84.9
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 7.2e-46 188.0 118 77.1
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 8.0e-45 184.5 120 74.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 8.0e-45 184.5 152 61.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 4.9e-42 175.3 108 77.8
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.6e-38 161.8 147 59.9
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 6.0e-32 141.7 184 45.1
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.7e-31 140.2 92 72.8
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 3.0e-31 139.4 189 47.1
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 3.9e-31 139.0 169 45.6
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 6.4e-26 121.7 137 46.7
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-24 116.7 134 49.3
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 3.5e-24 115.9 184 40.8
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 2.5e-22 109.8 230 33.9
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 3.3e-22 109.4 179 41.3
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.7e-10 70.5 150 32.7
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 4.6e-08 62.4 71 42.3
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.9e-06 57.0 54 59.3
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.9e-06 57.0 33 81.8
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 7.3e-06 55.1 34 73.5
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 7.3e-06 55.1 33 81.8


User provided reference genes

Program Settings