Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 6.6e-204 713.8 347 100.0
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.3e-156 555.8 353 77.9
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 5.6e-155 551.2 359 78.0
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 4.0e-153 545.0 358 76.0
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 4.0e-153 545.0 361 75.1
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.0e-153 545.0 361 75.1
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 5.3e-153 544.7 357 78.2
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 5.3e-153 544.7 361 75.1
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 2.0e-152 542.7 357 77.9
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 2.0e-152 542.7 360 75.0
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.4e-152 542.0 362 74.3
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.4e-152 542.0 362 74.6
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 1.7e-151 539.7 353 77.3
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.9e-151 538.9 359 74.7
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.9e-150 536.2 362 75.4
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.9e-150 536.2 362 75.4
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 4.2e-150 535.0 356 76.1
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 1.6e-149 533.1 353 75.1
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.6e-149 533.1 349 75.1
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.6e-149 533.1 370 74.3
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 1.6e-149 533.1 353 75.6
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 2.1e-149 532.7 351 74.9
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.6e-149 531.6 349 75.1
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 7.9e-149 530.8 349 75.4
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.3e-148 529.3 359 74.7
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 3.0e-148 528.9 360 75.0
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.1e-147 526.9 355 75.2
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.5e-147 526.6 349 75.6
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 1.5e-147 526.6 360 74.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.6e-146 523.1 350 75.4
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.8e-146 522.3 347 74.9
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.8e-146 522.3 350 74.3
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 4.8e-146 521.5 353 74.2
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.1e-145 520.4 358 74.3
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.4e-145 519.2 355 74.4
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 4.1e-145 518.5 362 73.2
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.2e-144 516.9 350 74.9
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 3.4e-144 515.4 356 72.5
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 4.5e-144 515.0 364 73.6
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 5.9e-144 514.6 374 71.1
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 5.9e-144 514.6 374 71.1
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 5.9e-144 514.6 355 73.2
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 8.5e-143 510.8 362 73.2
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 8.5e-143 510.8 367 71.4
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.5e-142 509.2 348 72.7
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 5.5e-142 508.1 356 71.3
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 2.7e-141 505.8 350 73.7
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 6.1e-141 504.6 363 70.8
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 7.9e-141 504.2 354 71.8
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 7.9e-141 504.2 362 70.2
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 3.0e-140 502.3 357 72.3
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 5.1e-140 501.5 348 71.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.1e-139 500.4 348 71.3
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.0e-139 499.6 348 73.9
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 2.5e-139 499.2 361 69.8
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 2.5e-139 499.2 362 70.7
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 2.5e-139 499.2 354 73.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.5e-139 499.2 364 70.3
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 3.3e-139 498.8 360 69.7
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 3.3e-139 498.8 327 76.8
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 3.3e-139 498.8 352 72.2
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 5.7e-139 498.0 352 70.5
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 9.7e-139 497.3 360 70.3
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.7e-138 496.5 362 70.4
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.7e-138 496.5 362 70.4
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 3.7e-138 495.4 361 69.8
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 8.2e-138 494.2 352 71.3
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.4e-137 493.4 361 69.8
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.8e-137 493.0 353 70.0
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.8e-137 493.0 359 68.8
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.2e-136 490.3 319 74.6
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 2.0e-136 489.6 347 70.0
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 4.5e-136 488.4 350 70.9
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.3e-135 486.9 348 71.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 1.7e-135 486.5 370 67.3
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 5.0e-135 485.0 361 67.6
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 4.2e-134 481.9 350 70.0
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.5e-134 481.5 358 69.3
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 9.4e-134 480.7 432 60.4
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.2e-133 480.3 327 73.4
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 6.1e-133 478.0 358 67.9
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 7.9e-133 477.6 356 67.4
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 7.9e-133 477.6 356 67.4
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.0e-132 477.2 328 74.4
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.9e-132 475.3 356 67.1
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 8.8e-132 474.2 352 68.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 5.7e-131 471.5 348 69.3
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.3e-130 470.3 347 67.4
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.8e-130 469.2 346 68.2
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.5e-128 462.2 350 65.7
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 3.5e-128 462.2 363 66.7
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 3.5e-128 462.2 355 66.2
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.5e-128 462.2 320 73.4
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.9e-126 456.4 357 64.4
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 4.7e-125 451.8 347 65.7
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 6.1e-125 451.4 353 66.6
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 8.8e-124 447.6 359 64.1
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.1e-121 440.7 352 62.8
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 7.7e-120 434.5 352 62.2
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.7e-119 433.3 361 63.2
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 1.9e-118 429.9 326 65.6
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 3.6e-117 425.6 365 61.9
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 4.7e-117 425.2 368 61.7
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 3.4e-115 419.1 282 76.2
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.4e-113 413.7 361 58.2
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.7e-112 407.9 289 73.7
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.3e-111 407.1 350 60.9
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 8.5e-111 404.4 286 73.8
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 3.2e-110 402.5 347 58.2
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 8.3e-106 387.9 339 58.1
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.4e-105 387.1 349 59.0
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.4e-105 387.1 303 62.7
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 4.0e-100 369.0 356 56.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.2e-100 368.6 318 61.3
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 2.8e-98 362.8 194 88.1
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 9.2e-97 357.8 194 86.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.7e-96 356.3 303 58.1
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 5.9e-96 355.1 228 75.9
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 1.0e-95 354.4 303 58.7
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.0e-95 354.4 293 61.1
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 3.9e-95 352.4 194 85.1
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.5e-94 349.7 348 54.9
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 4.3e-94 349.0 305 59.0
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.2e-93 347.4 354 53.1
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.2e-89 332.8 302 53.3
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 8.9e-68 261.5 153 81.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 7.3e-62 241.9 210 60.5
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.2e-58 230.3 126 83.3
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 3.0e-47 193.4 202 51.0
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 5.1e-47 192.6 100 88.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 9.0e-44 181.8 90 88.9
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 3.8e-42 176.4 180 53.9
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.9e-38 164.1 138 64.5
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.8e-31 141.0 229 42.4
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.9e-30 137.5 103 68.9
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 7.4e-30 135.6 151 50.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 2.4e-28 130.6 88 71.6
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.3e-26 124.8 73 75.3
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.2e-26 124.0 73 75.3
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.2e-24 118.2 134 52.2
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 7.9e-16 89.0 97 51.5
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 4.8e-13 79.7 43 83.7
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 8.8e-07 58.9 72 48.6


User provided reference genes

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