Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 9.4e-292 1006.1 510 100.0
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.8e-287 991.9 510 98.6
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.7e-200 703.0 512 70.3
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 4.6e-198 694.9 511 69.9
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 1.5e-193 679.9 499 69.1
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 5.0e-192 674.9 484 70.2
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.6e-190 669.8 495 68.7
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 6.7e-189 664.5 508 66.7
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 1.8e-186 656.4 508 65.9
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 1.7e-184 649.8 508 65.6
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 1.5e-183 646.7 496 66.5
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.5e-183 646.0 463 70.6
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 3.1e-178 629.0 497 63.8
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.2e-177 627.1 508 64.6
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 4.4e-172 608.6 494 62.1
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.5e-169 599.0 461 66.4
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 2.3e-168 596.3 493 63.7
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 5.0e-168 595.1 572 57.0
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 1.5e-167 593.6 486 62.1
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 5.9e-161 571.6 469 60.3
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 1.8e-154 550.1 472 59.5
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.2e-153 547.4 480 60.0
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.5e-151 540.4 474 60.5
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.2e-150 537.3 484 59.3
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 8.0e-150 534.6 472 59.7
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 1.5e-148 530.4 485 58.4
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.0e-136 491.1 478 56.7
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.8e-133 480.3 402 63.2
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.5e-132 477.2 377 63.7
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 7.8e-129 464.9 508 51.6
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.8e-126 456.4 473 51.4
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 6.2e-126 455.3 470 49.1
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.4e-125 454.1 470 49.1
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 9.6e-119 431.4 473 47.4
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 9.0e-117 424.9 514 47.7
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 8.4e-115 418.3 408 55.4
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 9.3e-114 414.8 439 48.7
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 2.1e-110 403.7 347 62.0
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.5e-108 396.0 338 59.2
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 4.2e-98 362.8 298 64.4
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 3.9e-80 303.1 509 39.3
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 3.7e-62 243.4 182 63.7
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 9.4e-58 228.8 696 29.5
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 3.1e-53 213.8 158 65.2
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 1.5e-50 204.9 224 45.1
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 4.5e-44 183.3 175 61.1
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 3.0e-27 127.5 96 63.5
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.9e-21 108.2 73 71.2
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 8.1e-17 92.8 82 51.2
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.8e-16 91.7 64 68.8
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 8.9e-16 89.4 61 70.5
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-14 84.3 91 50.5
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.1e-13 82.4 63 60.3
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 6.2e-09 66.6 65 46.2
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 9.0e-08 62.8 268 24.6
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 2.0e-07 61.6 248 24.6
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 7.6e-07 59.7 250 26.0
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 6.4e-06 56.6 251 23.9


User provided reference genes

Program Settings