Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 3.0e-54 214.9 107 100.0
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 4.0e-43 177.9 107 81.3
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 5.2e-43 177.6 107 82.2
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 5.2e-43 177.6 107 81.3
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 4.4e-42 174.5 107 77.6
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 6.4e-41 170.6 107 79.4
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 8.4e-41 170.2 107 77.6
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 8.4e-41 170.2 107 77.6
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.1e-40 169.9 105 76.2
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 2.4e-40 168.7 107 75.7
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.4e-40 168.7 104 78.8
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 2.4e-40 168.7 105 78.1
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 3.2e-40 168.3 106 78.3
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 4.1e-40 167.9 105 78.1
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 5.4e-40 167.5 107 76.6
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.2e-39 166.4 107 74.8
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 1.2e-39 166.4 107 75.7
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 74.3
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 74.3
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 1.6e-39 166.0 107 76.6
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 2.7e-39 165.2 107 74.8
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 3.5e-39 164.9 107 75.7
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 4.6e-39 164.5 107 75.7
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 75.2
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 75.2
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 6.0e-39 164.1 107 77.6
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 7.8e-39 163.7 107 76.6
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 7.8e-39 163.7 103 77.7
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 74.3
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.0e-38 163.3 107 74.8
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.0e-38 163.3 105 75.2
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 76.6
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.3e-38 162.9 104 74.0
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.3e-38 162.9 105 73.3
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 74.8
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 76.7
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 76.7
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 78.6
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 73.8
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 1.7e-38 162.5 105 75.2
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.7e-38 162.5 105 75.2
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.7e-38 162.5 105 77.1
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.3e-38 162.2 107 76.6
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 2.3e-38 162.2 107 73.8
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 2.3e-38 162.2 107 73.8
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 72.4
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 3.0e-38 161.8 107 74.8
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 3.0e-38 161.8 97 78.4
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 74.3
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.9e-38 161.4 103 75.7
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.9e-38 161.4 103 76.7
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 6.6e-38 160.6 107 72.0
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.6e-38 160.2 105 73.3
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 8.6e-38 160.2 107 74.8
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 73.3
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 71.4
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.1e-37 159.8 107 71.0
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 1.1e-37 159.8 107 72.0
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 72.4
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.5e-37 158.7 107 72.0
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 3.3e-37 158.3 107 72.0
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 3.3e-37 158.3 107 74.8
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.3e-37 158.3 103 72.8
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 71.4
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 71.4
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 73.3
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 5.6e-37 157.5 107 74.8
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 5.6e-37 157.5 107 74.8
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 5.6e-37 157.5 107 74.8
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 72.4
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 74.3
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 1.6e-36 156.0 107 72.9
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 2.8e-36 155.2 105 70.5
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 4.7e-36 154.5 107 74.8
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 4.7e-36 154.5 104 71.2
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 8.1e-36 153.7 107 71.0
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 1.1e-35 153.3 103 70.9
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.4e-35 152.9 103 69.9
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 1.4e-35 152.9 97 75.3
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 2.4e-35 152.1 107 68.2
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 2.4e-35 152.1 105 68.6
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 4.0e-35 151.4 103 69.9
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.0e-35 151.4 105 68.6
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.0e-35 151.4 105 68.6
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 6.9e-35 150.6 105 66.7
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 9.0e-35 150.2 103 68.9
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 1.2e-34 149.8 103 68.0
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.2e-34 149.8 107 69.2
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 1.5e-34 149.4 107 71.0
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 9.9e-34 146.7 105 66.7
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.9e-33 144.4 105 68.6
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 4.9e-33 144.4 107 67.3
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 8.4e-33 143.7 103 66.0
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 8.4e-33 143.7 105 67.6
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 1.4e-32 142.9 103 66.0
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 1.4e-32 142.9 133 57.1
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.9e-32 142.5 103 66.0
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.9e-32 142.5 103 65.0
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 1.2e-31 139.8 102 70.6
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 2.7e-31 138.7 101 69.3
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.7e-31 138.7 97 67.0
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 3.5e-31 138.3 105 64.8
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 1.1e-29 133.3 105 61.9
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 3.3e-29 131.7 101 63.4
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 7.3e-29 130.6 136 54.4
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 7.3e-29 130.6 109 65.1
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 1.6e-28 129.4 101 61.4
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.6e-28 129.4 103 59.2
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 8.1e-28 127.1 96 63.5
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.4e-27 126.3 93 64.5
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 6.9e-27 124.0 104 58.7
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 5.8e-26 120.9 76 77.6
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 7.6e-26 120.6 90 61.1
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.2e-25 119.0 78 73.1
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.4e-24 116.3 91 60.4
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 7.1e-24 114.0 91 60.4
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 7.9e-23 110.5 100 56.0
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 7.9e-23 110.5 77 70.1
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 6.7e-22 107.5 106 57.5
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 6.7e-22 107.5 76 69.7
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 6.7e-22 107.5 86 61.6
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 3.3e-21 105.1 83 62.7
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.6e-21 104.4 70 72.9
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 4.8e-20 101.3 70 71.4
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 4.8e-20 101.3 68 70.6
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.5e-18 96.3 105 52.4
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 1.5e-18 96.3 113 51.3
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.6e-18 95.5 72 62.5
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 1.3e-12 76.6 50 76.0
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 2.8e-12 75.5 46 76.1
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 9.0e-11 70.5 86 43.0
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 3.4e-10 68.6 42 69.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 2.9e-09 65.5 79 48.1
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 4.2e-08 61.6 51 62.7
ClCG10G020180 Citrullus lanatus HOM05D005747 ORTHO05D149649 1.0e-06 57.0 82 37.8


User provided reference genes

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