Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 3.1e-229 798.1 405 100.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.3e-168 595.9 405 73.1
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 2.9e-166 589.0 404 73.5
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 4.9e-166 588.2 405 73.3
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.8e-165 586.3 408 71.3
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 3.2e-165 585.5 404 73.5
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 9.2e-165 583.9 362 78.5
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.6e-164 583.2 405 73.3
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 2.7e-164 582.4 404 71.8
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.5e-164 582.0 405 72.1
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 3.5e-164 582.0 348 79.6
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 5.9e-164 581.3 411 70.8
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.0e-163 580.5 407 72.0
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 2.3e-163 579.3 387 74.9
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.0e-163 578.9 350 80.0
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 8.6e-163 577.4 362 78.2
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.3e-162 575.5 372 75.8
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 3.3e-162 575.5 365 77.0
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 5.6e-162 574.7 413 71.2
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 5.6e-162 574.7 348 79.6
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 9.5e-162 573.9 367 76.3
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.8e-161 572.4 371 75.5
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 2.8e-161 572.4 384 73.7
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 2.8e-161 572.4 397 72.5
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.6e-161 572.0 404 70.3
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.6e-161 572.0 353 78.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 6.2e-161 571.2 394 73.4
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 6.2e-161 571.2 348 78.7
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 8.0e-161 570.9 406 70.9
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.1e-160 570.5 381 75.1
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.4e-160 570.1 404 70.0
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.8e-160 569.7 407 70.8
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.8e-160 569.7 350 78.6
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 2.3e-160 569.3 350 78.0
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.3e-160 569.3 360 75.8
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.3e-160 569.3 353 77.3
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.1e-160 568.9 351 77.5
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 3.1e-160 568.9 350 78.3
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 4.0e-160 568.5 333 81.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 4.0e-160 568.5 350 77.7
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 6.8e-160 567.8 404 70.3
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 8.9e-160 567.4 348 77.9
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.5e-159 566.6 353 76.8
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.5e-159 566.6 348 78.7
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.0e-159 566.2 343 79.6
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.6e-159 565.8 372 75.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 2.6e-159 565.8 388 72.2
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.6e-159 565.8 407 70.3
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 2.6e-159 565.8 363 75.8
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 4.4e-159 565.1 348 77.6
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 9.8e-159 563.9 348 77.9
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 9.8e-159 563.9 404 69.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 9.8e-159 563.9 333 81.1
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 9.8e-159 563.9 360 75.3
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.3e-158 563.5 350 78.3
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.2e-158 562.8 358 76.5
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.9e-158 562.4 351 76.6
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.7e-158 562.0 349 77.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 4.9e-158 561.6 349 77.9
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 8.3e-158 560.8 408 69.4
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.1e-157 560.5 349 77.4
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.1e-157 560.5 369 74.5
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.1e-157 560.5 367 74.4
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.4e-157 560.1 400 70.2
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.9e-157 559.7 349 77.7
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.4e-157 559.3 371 73.6
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.2e-157 558.9 348 75.9
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 4.1e-157 558.5 330 81.2
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 5.4e-157 558.1 330 81.2
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 5.4e-157 558.1 353 75.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.0e-157 557.8 349 77.9
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 9.2e-157 557.4 374 73.3
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 1.2e-156 557.0 336 77.7
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.2e-156 557.0 327 81.7
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 3.5e-156 555.4 348 76.7
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 3.5e-156 555.4 348 76.7
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 3.5e-156 555.4 327 82.0
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 7.8e-156 554.3 336 77.1
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 7.8e-156 554.3 363 72.7
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.3e-155 553.5 360 73.3
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 3.0e-155 552.4 354 74.6
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 3.9e-155 552.0 331 80.7
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 6.6e-155 551.2 370 72.7
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.1e-154 550.4 410 68.3
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.5e-154 550.1 356 75.0
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 3.3e-154 548.9 463 63.5
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 4.3e-154 548.5 350 75.4
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 7.3e-154 547.7 404 68.6
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 4.7e-153 545.0 379 71.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 4.7e-153 545.0 319 80.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.1e-152 542.3 338 75.7
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.0e-152 542.0 367 71.4
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.2e-151 540.4 363 71.3
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 2.1e-148 529.6 350 72.9
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 3.5e-148 528.9 350 72.9
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-140 503.1 307 79.2
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-140 503.1 307 79.2
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 2.7e-140 502.7 348 69.0
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 5.8e-135 485.0 363 64.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 5.4e-133 478.4 341 68.3
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 7.1e-133 478.0 336 66.7
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 4.6e-132 475.3 369 62.6
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 5.6e-130 468.4 333 66.4
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 4.8e-129 465.3 386 61.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 7.6e-127 458.0 399 60.7
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 3.3e-122 442.6 356 64.6
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.1e-120 437.6 404 58.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 1.9e-117 426.8 326 61.0
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.6e-116 422.2 406 57.4
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 6.7e-107 391.7 376 53.7
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.5e-101 373.2 235 77.4
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 3.2e-101 372.9 289 65.7
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 3.2e-101 372.9 241 74.3
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.8e-99 367.1 328 54.3
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.5e-98 363.2 296 64.2
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 9.7e-98 361.3 287 63.8
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.3e-94 350.9 327 54.1
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.8e-91 340.5 375 48.5
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 4.8e-65 252.7 287 43.9
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.8e-64 250.8 165 72.7
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 4.5e-55 219.5 163 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.9e-53 214.2 169 60.9
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 3.5e-39 166.8 158 55.1
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.3e-37 160.2 131 62.6
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 2.1e-12 77.8 59 67.8
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 9.9e-10 68.9 35 85.7
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.2e-07 62.0 88 40.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.2e-07 62.0 88 40.9


User provided reference genes

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