Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0614 Cannabis sativa HOM05D000754 ORTHO05D000169 8.1e-116 420.6 244 100.0
Prupe.5G211200 Prunus persica HOM05D000754 ORTHO05D000169 8.6e-17 91.7 166 48.2
RcHm_v2.0_Chr3g0476411 Rosa chinensis HOM05D000754 ORTHO05D000169 6.2e-15 85.5 100 66.0
Duzib205G1066 Durio zibethinus HOM05D000754 ORTHO05D000169 8.1e-15 85.1 160 41.9
Potri.015G047700 Populus trichocarpa HOM05D000754 ORTHO05D000169 2.3e-14 83.6 87 54.0
FvH4_6g20610 Fragaria vesca HOM05D000754 ORTHO05D000169 3.1e-14 83.2 124 46.8
FAN05G2190 Fragaria x ananassa HOM05D000754 ORTHO05D000169 3.1e-14 83.2 124 46.8
FAN05G2993 Fragaria x ananassa HOM05D000754 ORTHO05D000169 3.1e-14 83.2 124 46.8
FAN14G2119 Fragaria x ananassa HOM05D000754 ORTHO05D000169 3.1e-14 83.2 124 46.8
MD06G1206800 Malus domestica HOM05D000754 ORTHO05D000169 4.0e-14 82.8 103 65.0
Atru.chr9.638 Acer truncatum HOM05D000754 ORTHO05D000169 2.0e-13 80.5 98 61.2
Sabra15G0079300 Salix brachista HOM05D000754 ORTHO05D000169 2.6e-13 80.1 83 55.4
BraA03t13777Z Brassica rapa HOM05D000754 ORTHO05D000169 3.4e-13 79.7 97 50.5
CsaV3_1G006310 Cucumis sativus L. HOM05D029639 ORTHO05D028900 4.4e-13 79.3 145 42.1
THA.LOC104800974 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 4.4e-13 79.3 110 46.4
A03p46530 Brassica napus HOM05D000754 ORTHO05D000169 5.8e-13 79.0 139 43.2
BcaNung02619 Brassica carinata HOM05D000754 ORTHO05D000169 9.9e-13 78.2 124 44.4
C07p44590 Brassica napus HOM05D000754 ORTHO05D000169 9.9e-13 78.2 124 44.4
BolC7t44980H Brassica oleracea HOM05D000754 ORTHO05D000169 9.9e-13 78.2 149 38.9
Thecc.03G110700 Theobroma cacao HOM05D000754 ORTHO05D000169 9.9e-13 78.2 149 39.6
FAN02G2472 Fragaria x ananassa HOM05D000754 ORTHO05D000169 1.3e-12 77.8 184 38.0
Manes.06G079700 Manihot esculenta HOM05D000754 ORTHO05D000169 1.7e-12 77.4 142 43.0
PGR044G1879 Punica granatum HOM05D000754 ORTHO05D000169 2.2e-12 77.0 98 49.0
BcaC06g33197 Brassica carinata HOM05D000754 ORTHO05D000169 2.9e-12 76.6 137 42.3
BcaNung05760 Brassica carinata HOM05D000754 ORTHO05D000169 2.9e-12 76.6 137 42.3
Cpa.g.sc3.213 Carica papaya HOM05D000754 ORTHO05D000169 2.9e-12 76.6 176 43.8
Aa31LG11G2450 Aethionema arabicum HOM05D000754 ORTHO05D000169 6.4e-12 75.5 183 35.0
Eucgr.K02632 Eucalyptus grandis HOM05D000754 ORTHO05D000169 1.1e-11 74.7 114 46.5
Gohir.D12G187100 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.1e-11 74.7 162 37.7
Gorai.008G200600 Gossypium raimondii HOM05D000754 ORTHO05D000169 1.1e-11 74.7 162 37.7
Ciclev10024105m.g Citrus clementina HOM05D000754 ORTHO05D000169 1.4e-11 74.3 183 34.4
COL.COLO4_28833 Corchorus olitorius HOM05D000754 ORTHO05D000169 4.1e-11 72.8 102 44.1
Gohir.A12G184400 Gossypium hirsutum HOM05D000754 ORTHO05D000169 4.1e-11 72.8 162 37.0
AT5G60830 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 2.1e-10 70.5 141 38.3
BolC9t53706H Brassica oleracea HOM05D000754 ORTHO05D000169 2.1e-10 70.5 177 36.2
Sp2g24150 Schrenkiella parvula HOM05D000754 ORTHO05D000169 2.1e-10 70.5 144 38.2
A02p41220 Brassica napus HOM05D000754 ORTHO05D000169 3.5e-10 69.7 85 52.9
C09p07940 Brassica napus HOM05D000754 ORTHO05D000169 3.5e-10 69.7 177 36.2
BcaB04g19891 Brassica carinata HOM05D000754 ORTHO05D000169 7.8e-10 68.6 87 46.0
BcaB04g19892 Brassica carinata HOM05D000754 ORTHO05D000169 7.8e-10 68.6 87 46.0
BcaC04g23478 Brassica carinata HOM05D000754 ORTHO05D000169 7.8e-10 68.6 160 38.1
Ca_21747_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 7.8e-10 68.6 102 45.1
Thhalv10005347m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 2.3e-09 67.0 138 40.6
FvH4_5g13260 Fragaria vesca HOM05D000754 ORTHO05D000169 2.3e-09 67.0 82 48.8
A09p07080 Brassica napus HOM05D000754 ORTHO05D000169 5.1e-09 65.9 138 40.6
BraA09t36357Z Brassica rapa HOM05D000754 ORTHO05D000169 5.1e-09 65.9 138 40.6
CiPaw.15G116000 Carya illinoinensis HOM05D000754 ORTHO05D000169 6.6e-09 65.5 180 32.8
C02p61100 Brassica napus HOM05D000754 ORTHO05D000169 8.6e-09 65.1 141 38.3
FAN18G1320 Fragaria x ananassa HOM05D000754 ORTHO05D000169 1.1e-08 64.7 82 47.6
THA.LOC104818363 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 1.1e-08 64.7 159 36.5
VMungo1215G2217 Vigna mungo HOM05D000754 ORTHO05D000169 1.1e-08 64.7 91 46.2
Phvul.009G204300 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 4.3e-08 62.8 78 51.3
BcaC03g18047 Brassica carinata HOM05D000754 ORTHO05D000169 5.6e-08 62.4 141 36.9
BolC2t12159H Brassica oleracea HOM05D000754 ORTHO05D000169 5.6e-08 62.4 137 38.7
FAN08G0941 Fragaria x ananassa HOM05D000754 ORTHO05D000169 9.5e-08 61.6 82 48.8
Lalb_Chr13g0302631 Lupinus albus HOM05D000754 ORTHO05D000169 9.5e-08 61.6 78 50.0
Ah.14g088020 Amaranthus hybridus HOM05D000754 ORTHO05D000169 1.2e-07 61.2 220 29.5
Duzib068G0124 Durio zibethinus HOM05D000754 ORTHO05D000169 4.7e-07 59.3 120 40.0
EL10Ac8g20053 Beta vulgaris HOM05D000754 ORTHO05D000169 8.1e-07 58.5 188 33.0
Phvul.003G181500 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 3.1e-06 56.6 66 53.0
Rhsim12G0147000 Rhododendron simsii HOM05D000754 ORTHO05D000169 4.0e-06 56.2 85 42.4
AL269U10024 Arabidopsis lyrata HOM05D000754 ORTHO05D000169 5.2e-06 55.8 89 41.6
AUR62021950 Chenopodium quinoa HOM05D000754 ORTHO05D000169 6.8e-06 55.5 145 35.9


User provided reference genes

Program Settings