Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 9.3e-150 533.5 264 100.0
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 1.6e-104 383.3 296 68.9
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 7.2e-102 374.4 295 69.5
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 5.3e-97 358.2 288 68.8
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.2e-96 357.1 321 62.3
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 2.7e-96 355.9 284 67.6
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 3.5e-96 355.5 286 66.1
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 4.5e-96 355.1 284 67.3
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 5.9e-96 354.8 284 68.7
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.2e-95 352.8 283 67.5
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.2e-95 352.8 283 67.5
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.9e-95 352.4 283 67.1
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.8e-95 352.1 284 66.9
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 5.0e-95 351.7 292 65.1
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 8.5e-95 350.9 281 66.2
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.9e-94 349.7 283 66.4
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 5.5e-94 348.2 292 64.7
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 1.4e-92 343.6 241 72.6
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 4.0e-92 342.0 286 65.7
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 8.8e-92 340.9 286 65.4
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 2.6e-91 339.3 295 63.4
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 9.8e-91 337.4 281 65.5
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 1.3e-90 337.0 294 62.2
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 1.7e-90 336.7 297 62.0
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 2.2e-90 336.3 286 63.3
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 4.8e-90 335.1 286 64.7
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 4.8e-90 335.1 298 60.1
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 8.3e-90 334.3 293 61.4
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 5.4e-89 331.6 294 61.2
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 7.0e-89 331.3 286 62.9
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 7.0e-89 331.3 212 76.9
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 9.1e-89 330.9 302 61.9
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 5.9e-88 328.2 281 62.6
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 1.0e-87 327.4 294 62.6
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 2.2e-87 326.2 280 63.9
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 3.8e-87 325.5 293 60.4
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 6.5e-87 324.7 300 60.0
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 6.5e-87 324.7 281 61.9
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 8.5e-87 324.3 287 61.3
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 1.1e-86 323.9 283 61.8
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 1.5e-86 323.6 285 62.8
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 3.2e-86 322.4 285 61.1
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 1.2e-85 320.5 283 63.3
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.6e-85 320.1 276 63.0
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 3.6e-85 318.9 297 60.6
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 6.1e-85 318.2 296 60.1
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 6.1e-85 318.2 213 74.6
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 1.0e-84 317.4 226 70.8
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.0e-84 317.4 295 60.3
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 1.4e-84 317.0 281 61.2
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 1.8e-84 316.6 239 68.2
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 3.0e-84 315.8 291 62.2
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 6.8e-84 314.7 287 60.3
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 8.8e-84 314.3 290 60.3
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 1.2e-83 313.9 215 74.0
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 2.0e-83 313.2 221 71.0
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.0e-83 313.2 228 70.2
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 3.4e-83 312.4 284 61.3
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 4.4e-83 312.0 217 72.4
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 4.4e-83 312.0 212 73.1
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 1.3e-82 310.5 276 62.0
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 2.2e-82 309.7 277 62.1
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 2.8e-82 309.3 286 59.4
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 4.9e-82 308.5 291 58.8
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 4.9e-82 308.5 286 60.1
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 4.9e-82 308.5 286 60.1
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.8e-81 306.6 244 64.3
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 2.4e-81 306.2 292 58.9
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 2.4e-81 306.2 211 71.6
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 2.4e-81 306.2 297 57.6
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 2.4e-81 306.2 297 57.6
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 3.1e-81 305.8 279 61.3
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 9.2e-81 304.3 273 60.1
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 1.2e-80 303.9 292 58.6
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 1.2e-80 303.9 226 67.7
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 1.6e-80 303.5 275 60.4
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.6e-80 303.5 307 56.0
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 3.5e-80 302.4 214 68.2
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 7.7e-80 301.2 211 71.6
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 1.0e-79 300.8 262 59.9
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 1.3e-79 300.4 285 58.9
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 2.3e-79 299.7 220 68.2
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 8.6e-79 297.7 315 54.6
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.1e-78 297.4 212 69.8
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 2.5e-78 296.2 215 66.5
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 1.6e-77 293.5 211 67.8
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.2e-75 287.3 185 76.2
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 4.4e-75 285.4 224 64.7
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 8.6e-71 271.2 229 64.2
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 9.5e-70 267.7 285 54.7
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 2.2e-66 256.5 241 54.4
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 4.9e-66 255.4 243 58.4
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 5.4e-65 251.9 195 62.6
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 8.1e-61 238.0 213 56.3
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 5.4e-57 225.3 212 52.4
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 6.6e-55 218.4 198 60.6
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 2.5e-54 216.5 191 63.9
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 7.6e-51 204.9 186 61.3
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 3.7e-50 202.6 222 52.3
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 3.5e-48 196.1 222 44.6
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 5.1e-47 192.2 217 45.6
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 5.1e-47 192.2 161 62.7
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 6.6e-47 191.8 132 72.7
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.1e-44 184.5 191 47.6
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.4e-43 179.5 126 71.4
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 5.4e-41 172.2 123 67.5
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 2.7e-40 169.9 152 59.2
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.8e-34 149.4 139 59.7
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 7.9e-32 141.7 84 78.6
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 2.3e-31 140.2 78 82.1
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.3e-30 136.3 68 94.1
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.6e-30 135.6 68 92.6
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 7.9e-24 115.2 151 51.0
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 6.5e-18 95.5 85 56.5
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 5.7e-14 82.4 222 25.2
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 1.6e-13 80.9 62 72.6
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 5.9e-11 72.4 167 28.1
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 1.1e-09 68.2 48 70.8
MCO04G452 Micromonas commoda HOM05D006384 ORTHO05D007917 1.4e-09 67.8 205 24.4
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 3.2e-09 66.6 54 66.7
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 1.2e-08 64.7 49 61.2
Cre12.g527850 Chlamydomonas reinhardtii HOM05D006384 ORTHO05D007917 6.1e-08 62.4 179 22.9
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 7.9e-08 62.0 45 62.2
DCAR_032298 Daucus carota HOM05D006384 ORTHO05D007917 3.3e-06 56.6 41 65.9
FAN14G2601 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.7e-06 55.1 46 60.9
FAN14G5547 Fragaria x ananassa HOM05D006384 ORTHO05D007917 9.7e-06 55.1 46 60.9


User provided reference genes

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