Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.0e-210 734.9 382 100.0
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.3e-164 582.0 385 75.8
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.8e-163 578.9 388 76.5
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 6.2e-163 577.8 389 75.1
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 2.4e-162 575.9 385 73.2
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.1e-162 575.5 385 73.2
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 9.0e-162 573.9 388 74.2
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 2.6e-161 572.4 383 74.7
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 9.9e-161 570.5 391 74.2
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.2e-160 569.3 391 74.7
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.9e-160 568.9 385 74.3
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.9e-160 568.9 385 74.3
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.9e-159 566.2 385 73.8
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 7.1e-159 564.3 388 73.7
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 7.1e-159 564.3 388 73.7
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.3e-159 563.9 386 73.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.2e-158 563.5 388 72.7
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.6e-158 563.1 389 73.3
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 2.1e-158 562.8 388 71.9
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.1e-158 562.8 386 73.3
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.7e-158 562.4 389 72.5
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.5e-158 562.0 386 73.3
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 4.6e-158 561.6 385 72.5
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 3.9e-157 558.5 389 72.0
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 3.9e-157 558.5 386 72.0
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 6.6e-157 557.8 389 71.0
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 7.3e-156 554.3 395 71.1
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.3e-156 554.3 388 71.9
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.6e-155 553.1 385 72.5
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 6.2e-155 551.2 384 75.3
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 6.2e-155 551.2 384 75.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.4e-154 550.1 388 70.9
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.4e-154 550.1 303 84.5
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 4.0e-154 548.5 388 70.4
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 5.3e-154 548.1 395 69.9
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 6.9e-154 547.7 303 84.2
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 9.0e-154 547.4 388 70.6
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.5e-153 546.6 385 69.1
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.5e-153 546.6 303 84.2
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 3.4e-153 545.4 388 70.6
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.5e-153 545.0 385 68.8
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.3e-152 543.5 396 70.5
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.3e-152 543.5 388 71.4
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.7e-152 543.1 382 73.0
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 3.8e-152 542.0 404 68.6
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.1e-151 540.4 385 71.9
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.4e-151 540.0 391 67.5
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.4e-151 540.0 380 70.3
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.4e-151 540.0 391 69.6
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.4e-151 540.0 383 70.5
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 2.4e-151 539.3 389 69.4
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 5.4e-151 538.1 388 69.3
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.2e-150 537.0 391 69.3
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.6e-150 536.6 394 69.0
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.6e-150 536.6 390 70.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 2.7e-150 535.8 462 61.9
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 3.5e-150 535.4 383 70.2
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 6.0e-150 534.6 382 69.4
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 6.0e-150 534.6 390 69.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 7.9e-150 534.3 389 70.2
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 2.3e-149 532.7 382 69.6
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 2.3e-149 532.7 390 68.5
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 3.0e-149 532.3 382 69.1
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.0e-149 532.3 383 70.0
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 3.9e-149 531.9 297 82.2
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 6.7e-149 531.2 382 69.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.7e-149 531.2 382 68.6
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.6e-147 526.6 383 70.0
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 1.4e-146 523.5 388 66.8
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 3.1e-146 522.3 385 69.6
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 6.9e-146 521.2 303 77.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 3.4e-145 518.8 434 63.6
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 3.4e-145 518.8 392 67.3
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.0e-144 517.3 375 69.3
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.1e-143 513.8 385 69.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 9.3e-143 510.8 491 59.7
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 7.9e-142 507.7 385 66.2
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-140 503.8 387 69.8
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 9.6e-140 500.7 382 63.9
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 4.0e-138 495.4 384 67.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 6.9e-138 494.6 283 80.2
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 2.6e-137 492.7 384 68.0
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 4.5e-137 491.9 382 65.4
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 7.1e-135 484.6 383 65.3
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.6e-134 483.4 382 64.9
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.6e-134 483.4 362 63.3
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.3e-133 480.3 396 66.4
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 2.3e-133 479.6 435 58.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.2e-131 473.0 393 63.1
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 2.2e-131 473.0 303 71.3
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.2e-131 473.0 382 62.3
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 8.2e-131 471.1 296 75.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.8e-128 462.2 275 77.1
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.4e-125 453.8 393 60.3
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 8.8e-125 451.1 393 60.6
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.4e-114 417.2 385 59.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.4e-114 416.4 365 60.0
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.6e-108 396.4 326 63.8
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 5.3e-106 388.7 228 79.4
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 5.3e-106 388.7 296 62.2
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.6e-105 386.3 293 62.1
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 1.2e-102 377.5 289 60.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 9.8e-100 367.9 288 58.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 2.2e-99 366.7 213 79.8
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.2e-99 366.7 213 79.8
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 2.2e-99 366.7 213 79.8
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 6.5e-96 355.1 216 71.3
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.6e-94 349.4 255 67.8
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 2.3e-93 346.7 213 76.5
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.5e-84 317.4 291 58.4
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 5.7e-84 315.5 287 50.5
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 8.9e-77 291.6 304 45.7
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 1.3e-75 287.7 285 47.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 2.9e-75 286.6 230 62.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.1e-71 274.6 278 47.8
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.5e-71 273.5 177 74.0
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 1.7e-67 260.8 157 79.6
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 2.9e-59 233.4 135 83.0
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-41 174.9 167 58.7
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 2.1e-41 174.1 161 52.8
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 5.1e-40 169.5 111 68.5
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 1.6e-33 147.9 108 63.0
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.7e-33 147.1 95 68.4
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.1e-29 133.7 170 45.9
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 9.3e-26 122.1 87 67.8
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 4.1e-21 106.7 64 73.4
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 7.2e-18 95.9 48 89.6
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 7.2e-18 95.9 48 89.6
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 2.7e-09 67.4 111 41.4
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.3e-06 58.5 41 70.7


User provided reference genes

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