Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 5.1e-73 277.7 148 100.0
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 2.6e-24 115.9 150 49.3
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 6.4e-23 111.3 149 53.7
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.1e-22 110.5 151 48.3
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 3.9e-20 102.1 148 52.7
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 5.1e-20 101.7 153 47.7
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 1.5e-19 100.1 142 45.8
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 1.5e-19 100.1 148 48.6
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 1.9e-19 99.8 128 50.0
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 2.5e-19 99.4 114 49.1
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 3.3e-19 99.0 137 47.4
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 4.3e-19 98.6 148 52.0
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 9.5e-19 97.4 144 45.1
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 2.1e-18 96.3 138 49.3
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 2.8e-18 95.9 105 51.4
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 3.6e-18 95.5 141 47.5
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 3.6e-18 95.5 146 45.2
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 6.2e-18 94.7 135 48.9
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 6.2e-18 94.7 130 46.2
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.1e-17 94.0 141 48.2
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 1.4e-17 93.6 132 50.0
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.4e-17 93.6 115 52.2
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 3.1e-17 92.4 148 43.9
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 4.0e-17 92.0 134 46.3
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 5.2e-17 91.7 150 47.3
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 5.2e-17 91.7 133 45.9
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 8.9e-17 90.9 117 51.3
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 2.0e-16 89.7 158 40.5
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 2.0e-16 89.7 142 43.7
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 2.6e-16 89.4 150 43.3
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 2.6e-16 89.4 92 56.5
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 2.6e-16 89.4 92 56.5
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 2.6e-16 89.4 143 43.4
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 3.4e-16 89.0 127 47.2
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 7.5e-16 87.8 142 41.5
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 7.5e-16 87.8 91 53.8
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 7.5e-16 87.8 123 44.7
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 9.9e-16 87.4 92 51.1
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 1.3e-15 87.0 133 46.6
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.7e-15 86.7 131 44.3
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 2.2e-15 86.3 125 45.6
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 2.2e-15 86.3 124 46.8
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.2e-15 86.3 135 46.7
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 2.9e-15 85.9 132 44.7
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 3.7e-15 85.5 101 52.5
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 4.9e-15 85.1 99 51.5
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 4.9e-15 85.1 89 46.1
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 6.4e-15 84.7 143 42.7
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 6.4e-15 84.7 133 47.4
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 8.3e-15 84.3 96 54.2
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 8.3e-15 84.3 140 45.0
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 8.3e-15 84.3 132 40.2
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 1.1e-14 84.0 86 58.1
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.4e-14 83.6 133 47.4
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.4e-14 83.6 133 47.4
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.9e-14 83.2 126 48.4
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 1.9e-14 83.2 132 44.7
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 1.9e-14 83.2 94 54.3
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.9e-14 83.2 94 54.3
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 2.4e-14 82.8 132 44.7
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 2.4e-14 82.8 132 44.7
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 3.2e-14 82.4 92 45.7
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 3.2e-14 82.4 114 49.1
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 5.4e-14 81.6 126 50.0
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 5.4e-14 81.6 145 44.1
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 7.1e-14 81.3 149 38.3
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 7.1e-14 81.3 147 38.8
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 1.2e-13 80.5 97 52.6
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 1.2e-13 80.5 97 52.6
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 1.6e-13 80.1 126 45.2
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 1.6e-13 80.1 126 45.2
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 1.6e-13 80.1 123 43.1
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 6.0e-13 78.2 127 45.7
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.0e-12 77.4 134 44.8
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 1.7e-12 76.6 92 54.3
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 2.3e-12 76.3 94 51.1
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 3.0e-12 75.9 132 39.4
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 5.1e-12 75.1 135 46.7
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 1.9e-11 73.2 133 40.6
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 2.5e-11 72.8 125 43.2
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 3.3e-11 72.4 93 48.4
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 3.3e-11 72.4 93 48.4
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.3e-11 72.0 108 47.2
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 5.6e-11 71.6 88 51.1
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 9.5e-11 70.9 107 43.0
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-10 70.5 86 48.8
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 2.1e-10 69.7 132 40.2
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 2.8e-10 69.3 94 46.8
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 3.6e-10 68.9 93 48.4
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 4.7e-10 68.6 111 41.4
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 6.2e-10 68.2 69 53.6
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 8.1e-10 67.8 136 37.5
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 1.4e-09 67.0 127 40.2
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 2.4e-09 66.2 136 39.0
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 2.4e-09 66.2 157 36.3
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 6.8e-09 64.7 105 43.8
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 1.2e-08 63.9 95 40.0
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 1.5e-08 63.5 108 46.3
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 2.6e-08 62.8 115 39.1
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 1.4e-06 57.0 75 48.0
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 5.4e-06 55.1 141 36.2


User provided reference genes

Program Settings