Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 2.9e-76 289.3 251 100.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 1.8e-22 110.5 247 38.5
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.5e-19 100.1 247 48.2
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.2e-18 97.8 247 35.6
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.6e-18 97.4 255 40.4
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 2.1e-18 97.1 254 42.5
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 3.6e-18 96.3 247 44.5
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 6.1e-18 95.5 254 40.6
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.0e-17 94.7 248 38.7
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.4e-17 94.4 248 38.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 5.2e-17 92.4 196 44.4
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 6.8e-17 92.0 257 42.0
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.6e-16 90.1 248 35.5
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 3.4e-16 89.7 254 41.3
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.4e-16 89.7 192 46.4
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 4.4e-16 89.4 247 38.5
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 5.7e-16 89.0 247 48.2
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 5.7e-16 89.0 247 51.8
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.3e-15 87.8 247 41.7
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.7e-15 87.4 187 42.2
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 2.2e-15 87.0 190 36.3
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 2.9e-15 86.7 248 43.1
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 6.4e-15 85.5 248 40.7
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 1.8e-14 84.0 248 40.3
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 5.4e-14 82.4 124 42.7
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 5.4e-14 82.4 124 42.7
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 5.4e-14 82.4 124 42.7
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.4e-14 82.4 257 32.3
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 9.2e-14 81.6 247 39.7
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 9.2e-14 81.6 253 41.5
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 9.2e-14 81.6 160 40.6
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 1.2e-13 81.3 248 42.3
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.2e-13 81.3 257 31.9
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 1.2e-13 81.3 249 45.4
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.2e-13 81.3 126 42.1
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.6e-13 80.9 124 41.9
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.6e-13 80.9 124 41.9
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.6e-13 80.9 247 42.1
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.0e-13 80.5 124 41.9
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 2.0e-13 80.5 124 41.9
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.0e-13 80.5 125 43.2
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.0e-13 80.5 124 41.9
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 2.0e-13 80.5 247 36.0
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 2.7e-13 80.1 124 41.9
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 2.7e-13 80.1 124 41.9
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.7e-13 80.1 124 41.1
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.0e-12 78.2 124 41.1
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.0e-12 78.2 124 41.1
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.0e-12 78.2 124 41.1
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.0e-12 78.2 188 32.4
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 1.3e-12 77.8 157 41.4
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.7e-12 77.4 248 42.3
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.7e-12 77.4 124 41.1
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-12 77.4 253 37.9
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-12 77.4 188 32.4
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-12 77.4 257 30.7
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.3e-12 77.0 189 46.0
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 3.0e-12 76.6 127 40.9
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 3.0e-12 76.6 248 39.1
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 3.0e-12 76.6 164 39.6
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.0e-12 76.6 164 39.6
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.0e-12 76.6 255 38.4
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 5.0e-12 75.9 124 41.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 5.0e-12 75.9 253 41.1
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.1e-11 74.7 124 41.1
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 1.1e-11 74.7 124 49.2
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.5e-11 74.3 193 42.0
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 1.9e-11 73.9 253 39.9
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 2.5e-11 73.6 194 32.0
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.5e-11 73.6 126 47.6
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 4.3e-11 72.8 194 37.1
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 4.3e-11 72.8 188 43.1
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 4.3e-11 72.8 250 33.2
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.3e-11 72.0 257 32.3
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 9.5e-11 71.6 122 54.9
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.2e-10 71.2 187 43.3
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.2e-10 71.2 247 39.7
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 1.6e-10 70.9 160 38.1
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.6e-10 70.9 188 35.6
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 1.6e-10 70.9 125 64.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.1e-10 70.5 192 42.7
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 2.8e-10 70.1 125 55.2
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 2.8e-10 70.1 125 63.2
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 3.6e-10 69.7 123 40.7
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.6e-10 69.7 124 55.6
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.6e-10 69.7 124 55.6
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.6e-10 69.7 124 55.6
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 8.0e-10 68.6 125 39.2
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 8.0e-10 68.6 124 55.6
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.0e-09 68.2 67 56.7
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.0e-09 68.2 246 37.4
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 1.4e-09 67.8 124 54.8
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 1.4e-09 67.8 124 39.5
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.8e-09 67.4 247 36.4
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 1.8e-09 67.4 124 54.8
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.3e-09 67.0 67 55.2
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.3e-09 67.0 122 39.3
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 2.3e-09 67.0 122 54.1
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 3.1e-09 66.6 124 59.7
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 3.1e-09 66.6 249 41.8
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.1e-09 66.6 126 54.0
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 3.1e-09 66.6 157 36.9
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 6.8e-09 65.5 250 36.8
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 8.9e-09 65.1 189 39.7
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 8.9e-09 65.1 189 41.3
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 8.9e-09 65.1 189 41.3
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 8.9e-09 65.1 125 52.8
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 8.9e-09 65.1 125 52.0
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.5e-08 64.3 124 57.3
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.5e-08 64.3 124 54.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.0e-08 63.9 246 36.6
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.6e-08 63.5 124 52.4
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 3.4e-08 63.2 125 52.0
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 4.4e-08 62.8 124 53.2
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 5.8e-08 62.4 33 97.0
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 5.8e-08 62.4 250 39.6
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 5.8e-08 62.4 124 52.4
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 7.5e-08 62.0 100 44.0
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.7e-07 60.8 128 51.6
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 2.2e-07 60.5 250 34.8
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 3.7e-07 59.7 124 51.6
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 4.9e-07 59.3 244 34.4
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.9e-06 57.4 33 87.9
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 3.2e-06 56.6 31 93.5
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 3.2e-06 56.6 32 87.5
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 3.2e-06 56.6 34 76.5
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 4.1e-06 56.2 187 39.6
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 4.1e-06 56.2 124 34.7


User provided reference genes

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