Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.5e-69 266.2 140 100.0
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 1.6e-36 156.4 132 65.2
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 3.4e-34 148.7 123 61.8
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 3.4e-34 148.7 127 58.3
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 3.4e-34 148.7 128 59.4
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 5.8e-34 147.9 127 56.7
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 7.6e-34 147.5 122 63.9
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.9e-34 147.1 128 64.8
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 9.9e-34 147.1 111 65.8
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-33 146.7 122 63.1
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.7e-33 146.4 120 63.3
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.9e-33 145.6 120 62.5
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 8.4e-33 144.1 130 56.9
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 8.4e-33 144.1 132 56.8
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.4e-32 143.3 127 55.9
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 1.4e-32 143.3 122 61.5
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.9e-32 142.9 137 56.2
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 5.4e-32 141.4 122 59.8
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 5.4e-32 141.4 123 59.3
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 7.1e-32 141.0 130 55.4
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 7.1e-32 141.0 128 57.0
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 9.3e-32 140.6 132 56.1
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.3e-32 140.6 128 62.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 1.6e-31 139.8 132 60.6
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.1e-31 139.4 133 56.4
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 2.7e-31 139.0 119 59.7
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 4.6e-31 138.3 133 57.1
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.6e-31 138.3 128 62.5
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 4.6e-31 138.3 131 56.5
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 4.6e-31 138.3 134 56.0
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 4.6e-31 138.3 127 55.1
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 6.0e-31 137.9 125 58.4
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.0e-30 137.1 130 55.4
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.0e-30 137.1 143 58.0
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 1.0e-30 137.1 124 58.9
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.0e-30 137.1 124 58.1
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.3e-30 136.7 130 60.0
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.3e-30 136.7 138 53.6
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 3.0e-30 135.6 122 58.2
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 5.1e-30 134.8 139 56.1
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 5.1e-30 134.8 122 54.1
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 5.1e-30 134.8 128 56.2
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 5.1e-30 134.8 124 57.3
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 6.7e-30 134.4 131 57.3
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 6.7e-30 134.4 126 54.8
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 8.7e-30 134.0 138 52.9
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 8.7e-30 134.0 139 55.4
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 8.7e-30 134.0 134 56.7
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 8.7e-30 134.0 128 54.7
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 8.7e-30 134.0 133 53.4
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 8.7e-30 134.0 140 59.3
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-29 133.3 139 55.4
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 1.5e-29 133.3 136 55.1
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 1.5e-29 133.3 125 56.8
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.5e-29 133.3 128 56.2
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 1.9e-29 132.9 130 55.4
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 1.9e-29 132.9 122 54.1
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 1.9e-29 132.9 122 54.1
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 2.5e-29 132.5 123 54.5
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 3.3e-29 132.1 125 54.4
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.3e-29 131.7 126 56.3
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 4.3e-29 131.7 127 53.5
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 5.6e-29 131.3 138 53.6
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 5.6e-29 131.3 130 55.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 7.4e-29 131.0 140 55.7
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 7.4e-29 131.0 151 53.6
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 7.4e-29 131.0 136 55.1
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.3e-28 130.2 133 54.1
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 1.3e-28 130.2 133 54.1
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 2.1e-28 129.4 136 52.2
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.1e-28 129.4 124 55.6
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 2.1e-28 129.4 122 54.1
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 2.1e-28 129.4 127 54.3
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.1e-28 129.4 123 53.7
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 2.8e-28 129.0 133 53.4
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 2.8e-28 129.0 133 52.6
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 4.8e-28 128.3 130 53.8
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 6.2e-28 127.9 130 55.4
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.1e-27 127.1 122 51.6
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 1.4e-27 126.7 122 54.9
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 3.1e-27 125.6 124 50.0
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 3.1e-27 125.6 141 49.6
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 4.0e-27 125.2 122 55.7
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 5.3e-27 124.8 130 50.0
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 5.3e-27 124.8 130 50.0
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 5.3e-27 124.8 130 50.0
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 6.9e-27 124.4 125 52.8
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 9.0e-27 124.0 122 55.7
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.5e-26 123.2 138 50.7
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 9.9e-26 120.6 126 53.2
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 9.9e-26 120.6 159 48.4
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.3e-25 120.2 126 54.0
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 2.9e-25 119.0 126 54.0
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 4.2e-24 115.2 126 50.8
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 7.1e-24 114.4 111 54.1
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.1e-24 114.4 105 62.9
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 3.9e-22 108.6 103 53.4
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 8.7e-22 107.5 162 43.8
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 3.7e-20 102.1 81 60.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.4e-19 100.1 73 64.4
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.4e-19 99.4 81 59.3
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.0e-18 96.3 127 45.7
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 2.6e-18 95.9 75 57.3
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.4e-18 95.5 117 46.2
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 1.1e-16 90.5 79 54.4
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.1e-15 86.3 99 49.5
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 7.9e-15 84.3 120 42.5
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.3e-14 83.6 120 43.3
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 2.3e-14 82.8 106 41.5
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 3.3e-13 79.0 117 40.2
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.1e-12 76.3 99 41.4
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 2.4e-11 72.8 80 48.8
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 2.2e-09 66.2 92 45.7
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 5.0e-09 65.1 98 43.9
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 5.0e-09 65.1 98 43.9
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.1e-08 63.9 92 44.6
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 2.5e-08 62.8 92 44.6
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 4.2e-08 62.0 89 44.9
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 1.3e-06 57.0 53 50.9
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 8.7e-06 54.3 47 61.7


User provided reference genes

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