Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.3e-174 616.3 318 100.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 2.2e-145 519.2 316 80.4
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 8.3e-145 517.3 318 80.5
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.5e-143 511.5 317 78.9
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.3e-142 509.2 318 79.9
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 3.8e-142 508.4 318 79.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.5e-141 506.5 316 80.4
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.5e-141 505.8 318 79.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.3e-141 505.0 318 79.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.6e-141 504.6 318 77.4
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.2e-140 503.4 317 76.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.1e-140 502.7 314 78.3
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.0e-139 500.4 315 77.8
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.4e-139 500.0 318 77.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.4e-139 500.0 315 77.8
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 5.2e-139 498.0 316 76.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.2e-139 498.0 315 77.5
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.8e-139 497.7 316 79.1
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.4e-138 495.4 321 78.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.4e-138 495.4 316 79.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 5.8e-138 494.6 318 75.8
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 7.5e-138 494.2 314 78.0
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 9.8e-138 493.8 317 76.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.7e-137 493.0 316 76.3
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-136 490.0 323 75.2
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.4e-136 489.2 318 75.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 5.4e-136 488.0 318 74.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 9.2e-136 487.3 318 74.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-135 486.5 318 76.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.3e-134 483.4 320 75.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.9e-134 481.9 318 74.5
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.1e-133 480.3 316 75.3
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.5e-133 479.2 303 78.5
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.2e-132 476.9 319 73.0
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 8.0e-132 474.2 315 74.3
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 7.5e-130 467.6 318 72.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.7e-129 466.5 318 72.6
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.2e-129 466.1 315 72.1
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.7e-129 465.3 318 76.1
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 3.2e-128 462.2 361 67.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.2e-128 462.2 315 71.1
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 3.2e-128 462.2 318 71.4
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 7.0e-128 461.1 315 71.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 7.0e-128 461.1 315 71.7
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 7.0e-128 461.1 315 71.7
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 9.2e-128 460.7 317 71.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.6e-127 459.9 325 70.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.6e-127 459.9 315 72.1
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.7e-127 459.1 306 72.2
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.5e-127 458.8 315 71.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.5e-127 458.8 315 71.4
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.0e-127 458.0 306 71.9
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.0e-127 458.0 303 74.9
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 7.8e-127 457.6 318 71.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-126 456.8 315 70.8
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 2.3e-126 456.1 338 68.9
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 6.6e-126 454.5 317 71.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 6.6e-126 454.5 297 76.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.1e-125 453.8 317 71.3
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.5e-125 452.6 307 71.7
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.3e-125 452.2 316 69.9
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 5.6e-125 451.4 316 71.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 7.3e-125 451.1 321 69.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.2e-124 448.0 317 70.0
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.1e-123 447.2 309 70.2
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.4e-123 446.8 303 71.3
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 2.0e-122 443.0 303 72.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.9e-121 439.1 318 70.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 3.7e-121 438.7 311 71.4
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 2.4e-120 436.0 317 66.9
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 5.4e-120 434.9 314 68.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 5.4e-120 434.9 318 67.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.3e-118 429.5 268 79.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 8.6e-118 427.6 318 70.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.5e-117 426.0 320 70.0
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 7.3e-117 424.5 298 71.5
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.4e-115 420.2 318 67.0
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 4.0e-115 418.7 318 68.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.9e-115 417.5 306 68.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.5e-114 416.8 317 65.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-112 410.2 339 65.5
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.3e-105 387.1 270 71.1
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.4e-104 383.6 270 74.4
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.4e-104 383.6 270 74.4
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.1e-103 379.8 315 64.1
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.9e-101 373.2 255 74.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 4.3e-101 372.1 316 62.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 4.6e-95 352.1 248 69.0
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.8e-92 342.8 233 70.4
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.4e-91 339.7 322 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.2e-88 329.3 315 49.8
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 3.9e-86 322.4 255 66.7
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.6e-85 317.8 317 49.8
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.8e-83 313.5 315 48.9
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.6e-82 309.7 319 51.7
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.1e-80 304.3 212 71.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 5.5e-80 302.0 215 68.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 6.0e-79 298.5 180 81.7
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 5.3e-75 285.4 204 67.6
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 8.5e-73 278.1 332 50.9
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.2e-72 275.8 233 59.7
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.7e-71 273.1 308 43.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 9.4e-64 248.1 268 48.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 4.8e-60 235.7 147 76.2
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 8.2e-60 235.0 339 38.1
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.6e-45 186.8 127 66.1
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.3e-45 186.4 228 46.5
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.7e-44 184.1 129 67.4
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 7.0e-35 152.1 247 38.5
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 2.8e-31 140.2 103 69.9
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 5.4e-27 125.9 88 70.5
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.1e-23 114.0 93 58.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.2e-21 108.2 212 34.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.2e-21 108.2 70 75.7
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.5e-10 70.1 70 48.6
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 2.8e-07 60.5 44 59.1
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 5.2e-06 56.2 46 67.4


User provided reference genes

Program Settings